Information for 12-GCATSATRCMYTT (Motif 12)

A C T G A G T C C G T A C G A T A T C G C G T A A C G T C T A G A G T C G T A C A G C T A C G T A C G T
Reverse Opposite:
C G T A C G T A C T G A A C T G A C T G A G T C C G T A A C G T A T G C C G T A C G A T A C T G A G T C
p-value:1e-8
log p-value:-1.952e+01
Information Content per bp:1.875
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.60%
Number of Background Sequences with motif3.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets46.2 +/- 22.6bp
Average Position of motif in Background80.7 +/- 11.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

OCT:OCT-short(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer

Match Rank:1
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----GCATSATRCMYTT
WYATGCATWATGCAT--
 A C G T A C G T A C G T A C G T A C T G A G T C C G T A C G A T A T C G C G T A A C G T C T A G A G T C G T A C A G C T A C G T A C G T
C G T A A G C T C G T A A C G T A C T G G T A C C G T A A C G T C G A T C G T A A C G T A C T G A G T C C G T A C G A T A C G T A C G T

PH0161.1_Six1/Jaspar

Match Rank:2
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GCATSATRCMYTT--
ANNNATGATACCCCATC
 A C G T A C G T A C T G A G T C C G T A C G A T A T C G C G T A A C G T C T A G A G T C G T A C A G C T A C G T A C G T A C G T A C G T
G T C A T G C A C G T A G T C A C T G A G A C T C A T G C G T A A G C T G T C A A G T C A T G C A G T C A G T C G C T A C G A T G A T C

PB0059.1_Six6_1/Jaspar

Match Rank:3
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GCATSATRCMYTT--
ANANNTGATACCCNATN
 A C G T A C G T A C T G A G T C C G T A C G A T A T C G C G T A A C G T C T A G A G T C G T A C A G C T A C G T A C G T A C G T A C G T
C T G A C G A T C G T A G C A T C T G A G A C T C T A G C G T A A G C T G T C A A G T C G T A C A G T C A G C T G C T A C G A T G A C T

PH0166.1_Six6_2/Jaspar

Match Rank:4
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GCATSATRCMYTT--
AATNTTGATACCCTATN
 A C G T A C G T A C T G A G T C C G T A C G A T A T C G C G T A A C G T C T A G A G T C G T A C A G C T A C G T A C G T A C G T A C G T
T G C A C T G A C G A T C T G A C G A T C G A T C A T G C G T A G A C T G T C A A G T C G A T C G A T C A G C T G C T A G C A T G A C T

Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:5
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GCATSATRCMYTT
TGAATTATGCAT--
 A C G T A C T G A G T C C G T A C G A T A T C G C G T A A C G T C T A G A G T C G T A C A G C T A C G T A C G T
C G A T C T A G G T C A G C T A C G A T G C A T G C T A C G A T C A T G G A T C G C T A C G A T A C G T A C G T

OCT:OCT(POU,Homeobox,IR1)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:6
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----GCATSATRCMYTT
TCATGAATWATTCAT--
 A C G T A C G T A C G T A C G T A C T G A G T C C G T A C G A T A T C G C G T A A C G T C T A G A G T C G T A C A G C T A C G T A C G T
G A C T G A T C G C T A C G A T C T A G G T C A C G T A C G A T G C A T C G T A G C A T C A G T A G T C G T C A C A G T A C G T A C G T

ATF4/MA0833.1/Jaspar

Match Rank:7
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----GCATSATRCMYTT
TATTGCATCATCC----
 A C G T A C G T A C G T A C G T A C T G A G T C C G T A C G A T A T C G C G T A A C G T C T A G A G T C G T A C A G C T A C G T A C G T
A C G T T C G A C G A T C A G T C T A G G T A C T C G A C G A T G A T C G T C A A C G T G T A C G A T C A C G T A C G T A C G T A C G T

DMRT3/MA0610.1/Jaspar

Match Rank:8
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GCATSATRCMYTT
-NTTGATACATT-
 A C T G A G T C C G T A C G A T A T C G C G T A A C G T C T A G A G T C G T A C A G C T A C G T A C G T
A C G T C G T A C G A T A C G T A C T G G C T A A C G T C G T A A G T C C G T A C G A T A C G T A C G T

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:9
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---GCATSATRCMYTT
ATTGCATCAK------
 A C G T A C G T A C G T A C T G A G T C C G T A C G A T A T C G C G T A A C G T C T A G A G T C G T A C A G C T A C G T A C G T
T C G A A C G T A C G T C T A G A G T C T C G A G C A T G T A C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:10
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---GCATSATRCMYTT
ATTGCATCAT------
 A C G T A C G T A C G T A C T G A G T C C G T A C G A T A T C G C G T A A C G T C T A G A G T C G T A C A G C T A C G T A C G T
T C G A G C A T A C G T C T A G G T A C T C G A G C A T T G A C T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T