Information for 6-CTGGCTGCAGGCAGGG (Motif 6)

A T G C C G A T A T C G A T C G A T G C A C G T A T C G A T G C C G T A A T C G A T C G A T G C C G T A C T A G C T A G A C T G
Reverse Opposite:
A G T C A G T C A G T C A C G T A T C G A T G C A T G C C G A T A T C G A T G C G T C A A T C G A T G C A T G C C G T A A T C G
p-value:1e-11
log p-value:-2.679e+01
Information Content per bp:1.797
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.00%
Number of Background Sequences with motif8.4
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets52.3 +/- 25.6bp
Average Position of motif in Background32.3 +/- 16.6bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.52
Offset:7
Orientation:forward strand
Alignment:CTGGCTGCAGGCAGGG--
-------AAGGCAAGTGT
 A T G C C G A T A T C G A T C G A T G C A C G T A T C G A T G C C G T A A T C G A T C G A T G C C G T A C T A G C T A G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:2
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:CTGGCTGCAGGCAGGG
-TGCCCNGGGGCA---
 A T G C C G A T A T C G A T C G A T G C A C G T A T C G A T G C C G T A A T C G A T C G A T G C C G T A C T A G C T A G A C T G
A C G T G A C T T A C G T A G C A G T C A G T C A C T G T C A G T C A G T C A G A T C G A T G C C T G A A C G T A C G T A C G T

TFAP2C/MA0524.2/Jaspar

Match Rank:3
Score:0.50
Offset:1
Orientation:reverse strand
Alignment:CTGGCTGCAGGCAGGG
-TGCCCTNGGGCA---
 A T G C C G A T A T C G A T C G A T G C A C G T A T C G A T G C C G T A A T C G A T C G A T G C C G T A C T A G C T A G A C T G
A C G T G A C T T A C G A T G C G A T C A G T C A G C T T C A G T C A G C T A G A T C G A T G C C T G A A C G T A C G T A C G T

THAP1/MA0597.1/Jaspar

Match Rank:4
Score:0.50
Offset:5
Orientation:reverse strand
Alignment:CTGGCTGCAGGCAGGG
-----TNNGGGCAG--
 A T G C C G A T A T C G A T C G A T G C A C G T A T C G A T G C C G T A A T C G A T C G A T G C C G T A C T A G C T A G A C T G
A C G T A C G T A C G T A C G T A C G T C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T A C G T

TFAP2B/MA0811.1/Jaspar

Match Rank:5
Score:0.50
Offset:1
Orientation:reverse strand
Alignment:CTGGCTGCAGGCAGGG
-TGCCCTNGGGCA---
 A T G C C G A T A T C G A T C G A T G C A C G T A T C G A T G C C G T A A T C G A T C G A T G C C G T A C T A G C T A G A C T G
A C G T G A C T T A C G A T G C A G T C A G T C A G C T T C A G T C A G C T A G A T C G A T G C C T G A A C G T A C G T A C G T

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:6
Score:0.49
Offset:0
Orientation:reverse strand
Alignment:CTGGCTGCAGGCAGGG
NTNGCCTCAGGCNNN-
 A T G C C G A T A T C G A T C G A T G C A C G T A T C G A T G C C G T A A T C G A T C G A T G C C G T A C T A G C T A G A C T G
G C T A C A G T G A C T A T C G A G T C A G T C A G C T T A G C T C G A T C A G A C T G T A G C C G T A C G T A C G A T A C G T

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:7
Score:0.49
Offset:2
Orientation:forward strand
Alignment:CTGGCTGCAGGCAGGG
--AGCCTCAGGCA---
 A T G C C G A T A T C G A T C G A T G C A C G T A T C G A T G C C G T A A T C G A T C G A T G C C G T A C T A G C T A G A C T G
A C G T A C G T G T C A T A C G A T G C A G T C A G C T T A G C T G C A T C A G T A C G T A G C C G T A A C G T A C G T A C G T

NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:8
Score:0.49
Offset:0
Orientation:reverse strand
Alignment:CTGGCTGCAGGCAGGG
TTGGCANNNTGCCAAG
 A T G C C G A T A T C G A T C G A T G C A C G T A T C G A T G C C G T A A T C G A T C G A T G C C G T A C T A G C T A G A C T G
G A C T C A G T A C T G C T A G T G A C G C T A T A G C C G T A T A C G C G A T A C T G G A T C G T A C G T C A C T G A T C A G

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:9
Score:0.49
Offset:2
Orientation:forward strand
Alignment:CTGGCTGCAGGCAGGG
--AGCCTCAGGCA---
 A T G C C G A T A T C G A T C G A T G C A C G T A T C G A T G C C G T A A T C G A T C G A T G C C G T A C T A G C T A G A C T G
A C G T A C G T G T C A T A C G A T G C A G T C A G C T T A G C T C G A T C A G A T C G T A G C C G T A A C G T A C G T A C G T

TFAP2A/MA0003.3/Jaspar

Match Rank:10
Score:0.48
Offset:2
Orientation:forward strand
Alignment:CTGGCTGCAGGCAGGG
--CGCCTCAGGCA---
 A T G C C G A T A T C G A T C G A T G C A C G T A T C G A T G C C G T A A T C G A T C G A T G C C G T A C T A G C T A G A C T G
A C G T A C G T G T A C T A C G A T G C A G T C A G C T T A G C T G C A T C A G A T C G T A G C C G T A A C G T A C G T A C G T