Information for 4-TGGCAGCAGAGGA (Motif 3)

C G A T A C T G A C T G G T A C C G T A A C T G A G T C C G T A C T A G C G T A A C T G A T C G C G T A
Reverse Opposite:
A C G T A T G C A G T C C G A T A G T C A C G T A C T G A G T C A C G T A C T G A G T C A G T C C G T A
p-value:1e-13
log p-value:-3.111e+01
Information Content per bp:1.903
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.75%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets59.9 +/- 22.7bp
Average Position of motif in Background74.2 +/- 6.4bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:1
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--TGGCAGCAGAGGA
TGAGTCAGCA-----
 A C G T A C G T C G A T A C T G A C T G G T A C C G T A A C T G A G T C C G T A C T A G C G T A A C T G A T C G C G T A
G A C T T A C G C G T A T A C G G A C T G T A C G C T A C T A G A G T C C T G A A C G T A C G T A C G T A C G T A C G T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:TGGCAGCAGAGGA
-GGGAGGACNG--
 C G A T A C T G A C T G G T A C C G T A A C T G A G T C C G T A C T A G C G T A A C T G A T C G C G T A
A C G T C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G A C G T A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--TGGCAGCAGAGGA
CTTGGCAA-------
 A C G T A C G T C G A T A C T G A C T G G T A C C G T A A C T G A G T C C G T A C T A G C G T A A C T G A T C G C G T A
A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0003.1_Ascl2_1/Jaspar

Match Rank:4
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---TGGCAGCAGAGGA-
NNNNAGCAGCTGCTGAN
 A C G T A C G T A C G T C G A T A C T G A C T G G T A C C G T A A C T G A G T C C G T A C T A G C G T A A C T G A T C G C G T A A C G T
G T A C C G T A C T A G A C G T T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T C A G T G C A T C A G

ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer

Match Rank:5
Score:0.55
Offset:0
Orientation:forward strand
Alignment:TGGCAGCAGAGGA
AGGAAACAGCTG-
 C G A T A C T G A C T G G T A C C G T A A C T G A G T C C G T A C T A G C G T A A C T G A T C G C G T A
T C G A A C T G A C T G C G T A C G T A T C G A A G T C C T G A A T C G G T A C G C A T C A T G A C G T

NFIC/MA0161.1/Jaspar

Match Rank:6
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-TGGCAGCAGAGGA
TTGGCA--------
 A C G T C G A T A C T G A C T G G T A C C G T A A C T G A G T C C G T A C T A G C G T A A C T G A T C G C G T A
G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NHLH1/MA0048.2/Jaspar

Match Rank:7
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:TGGCAGCAGAGGA
-CGCAGCTGCG--
 C G A T A C T G A C T G G T A C C G T A A C T G A G T C C G T A C T A G C G T A A C T G A T C G C G T A
A C G T T G A C C T A G A T G C T C G A A T C G T A G C A C G T A C T G A G T C A C T G A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:8
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--TGGCAGCAGAGGA
NTTGGCANN------
 A C G T A C G T C G A T A C T G A C T G G T A C C G T A A C T G A G T C C G T A C T A G C G T A A C T G A T C G C G T A
A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T A C G T A C G T A C G T A C G T A C G T

NRL/MA0842.1/Jaspar

Match Rank:9
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:TGGCAGCAGAGGA
-GTCAGCANNTN-
 C G A T A C T G A C T G G T A C C G T A A C T G A G T C C G T A C T A G C G T A A C T G A T C G C G T A
A C G T T C A G C G A T G T A C C G T A C A T G A G T C C T G A C G T A C G T A G C A T G C A T A C G T

NFIA/MA0670.1/Jaspar

Match Rank:10
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---TGGCAGCAGAGGA
NNTTGGCANN------
 A C G T A C G T A C G T C G A T A C T G A C T G G T A C C G T A A C T G A G T C C G T A C T A G C G T A A C T G A T C G C G T A
G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C A C G T A C G T A C G T A C G T A C G T A C G T