Information for 5-CCGGTCCTGGGAC (Motif 6)

A G T C A G T C C T A G A T C G G A C T A G T C A G T C A G C T C T A G A C T G A T C G G T C A A G T C
Reverse Opposite:
A C T G A C G T A T G C G T A C A G T C C T G A A C T G A C T G C T G A A T G C A G T C T C A G A C T G
p-value:1e-11
log p-value:-2.565e+01
Information Content per bp:1.801
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.58%
Number of Background Sequences with motif49.8
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets54.2 +/- 25.4bp
Average Position of motif in Background52.5 +/- 24.3bp
Strand Bias (log2 ratio + to - strand density)-1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:1
Score:0.59
Offset:3
Orientation:forward strand
Alignment:CCGGTCCTGGGAC
---RTCATGTGAC
 A G T C A G T C C T A G A T C G G A C T A G T C A G T C A G C T C T A G A C T G A T C G G T C A A G T C
A C G T A C G T A C G T T C A G A G C T A T G C C G T A A G C T T C A G C A G T A C T G C T G A A G T C

ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----CCGGTCCTGGGAC---
GAGCCTGGTACTGWGCCTGR
 A C G T A C G T A C G T A C G T A G T C A G T C C T A G A T C G G A C T A G T C A G T C A G C T C T A G A C T G A T C G G T C A A G T C A C G T A C G T A C G T
T A C G C T G A C A T G G A T C G T A C G C A T T C A G T A C G A G C T G T C A G A T C G C A T T A C G C G T A C T A G G A T C G A T C C G A T A C T G T C A G

Zfx/MA0146.2/Jaspar

Match Rank:3
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----CCGGTCCTGGGAC
GGGGCCGAGGCCTG----
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C C T A G A T C G G A C T A G T C A G T C A G C T C T A G A C T G A T C G G T C A A G T C
A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G A C G T A C G T A C G T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:4
Score:0.55
Offset:5
Orientation:forward strand
Alignment:CCGGTCCTGGGAC--
-----CCAGGAACAG
 A G T C A G T C C T A G A T C G G A C T A G T C A G T C A G C T C T A G A C T G A T C G G T C A A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G

REST/MA0138.2/Jaspar

Match Rank:5
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--CCGGTCCTGGGAC------
TTCAGCACCATGGACAGCGCC
 A C G T A C G T A G T C A G T C C T A G A T C G G A C T A G T C A G T C A G C T C T A G A C T G A T C G G T C A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
C A G T A G C T G A T C T C G A T A C G A T G C C G T A A T G C G A T C G C T A G A C T C T A G T C A G G T C A A T G C G C T A T C A G G T A C C A T G T A G C G A T C

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:6
Score:0.52
Offset:2
Orientation:forward strand
Alignment:CCGGTCCTGGGAC
--AGGCCTAG---
 A G T C A G T C C T A G A T C G G A C T A G T C A G T C A G C T C T A G A C T G A T C G G T C A A G T C
A C G T A C G T T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G A C G T A C G T A C G T

ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-CCGGTCCTGGGAC-
BCNGGTTCTAGANCN
 A C G T A G T C A G T C C T A G A T C G G A C T A G T C A G T C A G C T C T A G A C T G A T C G G T C A A G T C A C G T
A G C T T G A C C T A G C A T G C T A G G A C T A C G T A G T C A G C T C T G A T A C G T C G A C G A T A G T C G A C T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:CCGGTCCTGGGAC
CNAGGCCT-----
 A G T C A G T C C T A G A T C G G A C T A G T C A G T C A G C T C T A G A C T G A T C G G T C A A G T C
A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T A C G T A C G T A C G T A C G T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:9
Score:0.51
Offset:5
Orientation:reverse strand
Alignment:CCGGTCCTGGGAC--
-----CSTGGGAAAD
 A G T C A G T C C T A G A T C G G A C T A G T C A G T C A G C T C T A G A C T G A T C G G T C A A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A

REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer

Match Rank:10
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-CCGGTCCTGGGAC------
TCAGCACCATGGACAGCTCC
 A C G T A G T C A G T C C T A G A T C G G A C T A G T C A G T C A G C T C T A G A C T G A T C G G T C A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A G C T G A T C C T G A T C A G T A G C C T G A A T G C G A T C G C T A G A C T C T A G C T A G G T C A A T G C C G T A T C A G G T A C C A G T T A G C G A T C