Information for 11-GTAACACAGG (Motif 15)

A C T G A C G T C G T A C G T A A G T C C G T A A G T C C G T A A C T G A C T G
Reverse Opposite:
A G T C A G T C A C G T A C T G A C G T A C T G A C G T A C G T C G T A A G T C
p-value:1e-8
log p-value:-1.945e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.49%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets49.0 +/- 23.4bp
Average Position of motif in Background73.6 +/- 6.1bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox2/MA0143.3/Jaspar

Match Rank:1
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:GTAACACAGG
--AACAAAGG
 A C T G A C G T C G T A C G T A A G T C C G T A A G T C C G T A A C T G A C T G
A C G T A C G T T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G

POL009.1_DCE_S_II/Jaspar

Match Rank:2
Score:0.66
Offset:4
Orientation:reverse strand
Alignment:GTAACACAGG
----CACAGN
 A C T G A C G T C G T A C G T A A G T C C G T A A G T C C G T A A C T G A C T G
A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C

PB0119.1_Foxa2_2/Jaspar

Match Rank:3
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----GTAACACAGG-
AAAAATAACAAACGG
 A C G T A C G T A C G T A C G T A C T G A C G T C G T A C G T A A G T C C G T A A G T C C G T A A C T G A C T G A C G T
T C G A T C G A C G T A C G T A G T C A A C G T C T G A C G T A G A T C G T C A G C T A C T G A T A G C T A C G A T C G

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:4
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GTAACACAGG
GGAACAAAGR
 A C T G A C G T C G T A C G T A A G T C C G T A A G T C C G T A A C T G A C T G
T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G

PB0071.1_Sox4_1/Jaspar

Match Rank:5
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---GTAACACAGG----
AGAAGAACAAAGGACTA
 A C G T A C G T A C G T A C T G A C G T C G T A C G T A A G T C C G T A A G T C C G T A A C T G A C T G A C G T A C G T A C G T A C G T
G T C A A C T G C T G A C G T A C T A G T C G A C G T A A G T C C G T A C G T A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

PB0061.1_Sox11_1/Jaspar

Match Rank:6
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---GTAACACAGG----
ATAAGAACAAAGGACTA
 A C G T A C G T A C G T A C T G A C G T C G T A C G T A A G T C C G T A A G T C C G T A A C T G A C T G A C G T A C G T A C G T A C G T
G C T A A C G T C G T A C G T A C T A G T C G A C G T A A G T C C G T A G T C A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

Sox3/MA0514.1/Jaspar

Match Rank:7
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GTAACACAGG
AAAACAAAGG
 A C T G A C G T C G T A C G T A A G T C C G T A A G T C C G T A A C T G A C T G
T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G

PB0159.1_Rfx4_2/Jaspar

Match Rank:8
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---GTAACACAGG--
NNNGTAACTANGNNA
 A C G T A C G T A C G T A C T G A C G T C G T A C G T A A G T C C G T A A G T C C G T A A C T G A C T G A C G T A C G T
A C G T A T G C A T C G A C T G G A C T G T C A C G T A G T A C A G C T G C T A C A T G A T C G T A C G C A G T C G T A

SOX10/MA0442.1/Jaspar

Match Rank:9
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:GTAACACAGG
---ACAAAG-
 A C T G A C G T C G T A C G T A A G T C C G T A A G T C C G T A A C T G A C T G
A C G T A C G T A C G T G T C A A T G C C G T A T G C A C G T A C T A G A C G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:10
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:GTAACACAGG
--RACAAWGG
 A C T G A C G T C G T A C G T A A G T C C G T A A G T C C G T A A C T G A C T G
A C G T A C G T T C G A G T C A T G A C C G T A C G T A C G T A C T A G T A C G