Information for 9-CACCGYGCTGCAG (Motif 12)

A G T C C G T A A G T C A G T C T C A G A G C T A T C G A G T C A G C T A C T G A G T C C G T A A C T G
Reverse Opposite:
A G T C A C G T C T A G T A G C C T G A A C T G A T G C T C G A A G T C A C T G C T A G A C G T A C T G
p-value:1e-9
log p-value:-2.168e+01
Information Content per bp:1.820
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.61%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets33.0 +/- 23.0bp
Average Position of motif in Background57.8 +/- 22.6bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0091.1_Zbtb3_1/Jaspar

Match Rank:1
Score:0.53
Offset:0
Orientation:forward strand
Alignment:CACCGYGCTGCAG----
AATCGCACTGCATTCCG
 A G T C C G T A A G T C A G T C T C A G A G C T A T C G A G T C A G C T A C T G A G T C C G T A A C T G A C G T A C G T A C G T A C G T
C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.51
Offset:5
Orientation:reverse strand
Alignment:CACCGYGCTGCAG----
-----GGCTCYAKCAYC
 A G T C C G T A A G T C A G T C T C A G A G C T A T C G A G T C A G C T A C T G A G T C C G T A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A T G A C T G A G T C A C G T A G T C G A T C C G T A A C T G T A G C C T G A A G C T T A G C

GATA:SCL(Zf,bHLH)/Ter119-SCL-ChIP-Seq(GSE18720)/Homer

Match Rank:3
Score:0.50
Offset:-4
Orientation:reverse strand
Alignment:----CACCGYGCTGCAG---
TTATCTGNNNNCNNCAGCNG
 A C G T A C G T A C G T A C G T A G T C C G T A A G T C A G T C T C A G A G C T A T C G A G T C A G C T A C T G A G T C C G T A A C T G A C G T A C G T A C G T
G A C T G C A T C T G A A C G T A G T C C G A T A T C G G A C T A T C G T A G C T A G C T A G C G T A C T A C G G T A C C G T A A T C G T A G C G A T C A C T G

POL008.1_DCE_S_I/Jaspar

Match Rank:4
Score:0.50
Offset:6
Orientation:forward strand
Alignment:CACCGYGCTGCAG
------GCTTCC-
 A G T C C G T A A G T C A G T C T C A G A G C T A T C G A G T C A G C T A C T G A G T C C G T A A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C A C G T

POL006.1_BREu/Jaspar

Match Rank:5
Score:0.48
Offset:1
Orientation:forward strand
Alignment:CACCGYGCTGCAG
-AGCGCGCC----
 A G T C C G T A A G T C A G T C T C A G A G C T A T C G A G T C A G C T A C T G A G T C C G T A A C T G
A C G T T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C A C G T A C G T A C G T A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:6
Score:0.48
Offset:2
Orientation:forward strand
Alignment:CACCGYGCTGCAG----
--CCACACAGCAGGAGA
 A G T C C G T A A G T C A G T C T C A G A G C T A T C G A G T C A G C T A C T G A G T C C G T A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

POL009.1_DCE_S_II/Jaspar

Match Rank:7
Score:0.48
Offset:8
Orientation:reverse strand
Alignment:CACCGYGCTGCAG-
--------CACAGN
 A G T C C G T A A G T C A G T C T C A G A G C T A T C G A G T C A G C T A C T G A G T C C G T A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C

POL010.1_DCE_S_III/Jaspar

Match Rank:8
Score:0.48
Offset:5
Orientation:reverse strand
Alignment:CACCGYGCTGCAG
-----NGCTN---
 A G T C C G T A A G T C A G T C T C A G A G C T A T C G A G T C A G C T A C T G A G T C C G T A A C T G
A C G T A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T

ZIC1/MA0696.1/Jaspar

Match Rank:9
Score:0.48
Offset:-2
Orientation:forward strand
Alignment:--CACCGYGCTGCAG
GACCCCCCGCTGTG-
 A C G T A C G T A G T C C G T A A G T C A G T C T C A G A G C T A T C G A G T C A G C T A C T G A G T C C G T A A C T G
A C T G T C G A G T A C G T A C G T A C A G T C G T A C G A T C T C A G A G T C A C G T T C A G G A C T A C T G A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:10
Score:0.47
Offset:3
Orientation:reverse strand
Alignment:CACCGYGCTGCAG--
---CCCCCTGCTGTG
 A G T C C G T A A G T C A G T C T C A G A G C T A T C G A G T C A G C T A C T G A G T C C G T A A C T G A C G T A C G T
A C G T A C G T A C G T G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G