Information for 7-CATCAGTCCT (Motif 12)

G T A C G T C A A C G T A T G C C G T A A C T G C G A T A G T C G T A C C G A T
Reverse Opposite:
C G T A A C T G T C A G G C T A A G T C C G A T A T C G T G C A A C G T A C T G
p-value:1e-8
log p-value:-1.964e+01
Information Content per bp:1.836
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif2.07%
Number of Background Sequences with motif153.6
Percentage of Background Sequences with motif0.32%
Average Position of motif in Targets52.9 +/- 28.5bp
Average Position of motif in Background48.2 +/- 27.1bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFE2/MA0841.1/Jaspar

Match Rank:1
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:CATCAGTCCT-
GATGAGTCATN
 G T A C G T C A A C G T A T G C C G T A A C T G C G A T A G T C G T A C C G A T A C G T
T A C G T C G A A C G T C T A G T C G A A T C G C A G T G T A C C T G A A G C T A C T G

JDP2/MA0655.1/Jaspar

Match Rank:2
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:CATCAGTCCT
-ATGAGTCAT
 G T A C G T C A A C G T A T G C C G T A A C T G C G A T A G T C G T A C C G A T
A C G T C T G A C G A T C A T G G C T A A T C G G C A T T G A C C T G A A G C T

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:3
Score:0.65
Offset:-6
Orientation:reverse strand
Alignment:------CATCAGTCCT-
CCNNACCATCTGGCCTN
 A C G T A C G T A C G T A C G T A C G T A C G T G T A C G T C A A C G T A T G C C G T A A C T G C G A T A G T C G T A C C G A T A C G T
A G T C T A G C T A C G C T A G T C G A G T A C A G T C C G T A A G C T T G A C A G C T C A T G A T C G G T A C G A T C A G C T C A G T

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:4
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--CATCAGTCCT
ACCATCTGTT--
 A C G T A C G T G T A C G T C A A C G T A T G C C G T A A C T G C G A T A G T C G T A C C G A T
T C G A T G A C G T A C C G T A C A G T T G A C A C G T A C T G A G C T A G C T A C G T A C G T

PBX1/MA0070.1/Jaspar

Match Rank:5
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-CATCAGTCCT-
CCATCAATCAAA
 A C G T G T A C G T C A A C G T A T G C C G T A A C T G C G A T A G T C G T A C C G A T A C G T
G A T C A G T C T C G A G A C T A G T C G T C A C G T A A C G T A G T C G C T A C G T A C G T A

HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer

Match Rank:6
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CATCAGTCCT
GYCATCMATCAT
 A C G T A C G T G T A C G T C A A C G T A T G C C G T A A C T G C G A T A G T C G T A C C G A T
T A C G G A C T T G A C C G T A A C G T G A T C G T C A C G T A A C G T A T G C C G T A G A C T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:7
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CATCAGTCCT
GCCATCTGTT--
 A C G T A C G T G T A C G T C A A C G T A T G C C G T A A C T G C G A T A G T C G T A C C G A T
T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T A C G T A C G T

PH0134.1_Pbx1/Jaspar

Match Rank:8
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----CATCAGTCCT--
TCACCCATCAATAAACA
 A C G T A C G T A C G T A C G T A C G T G T A C G T C A A C G T A T G C C G T A A C T G C G A T A G T C G T A C C G A T A C G T A C G T
G A C T A G T C C G T A G A T C G T A C T G A C C T G A C G A T G T A C G T C A G C T A C G A T G T A C G C T A C G A T T G A C T G C A

POL002.1_INR/Jaspar

Match Rank:9
Score:0.61
Offset:2
Orientation:forward strand
Alignment:CATCAGTCCT
--TCAGTCTT
 G T A C G T C A A C G T A T G C C G T A A C T G C G A T A G T C G T A C C G A T
A C G T A C G T C A G T A G T C C G T A A T C G G A C T G A T C A G C T A G C T

Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer

Match Rank:10
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CATCAGTCCT
TCATCAATCA-
 A C G T G T A C G T C A A C G T A T G C C G T A A C T G C G A T A G T C G T A C C G A T
G A C T G T A C T G C A A C G T G A T C G C T A T C G A A C G T A G T C C G T A A C G T