Information for 18-AGAGAGAGAG (Motif 36)

C T G A C T A G T G C A C T A G G C T A C T A G G T C A C T A G G T C A A C T G
Reverse Opposite:
T G A C A C G T A G T C A C G T A G T C C G A T A G T C A C G T A G T C A G C T
p-value:1e-4
log p-value:-1.074e+01
Information Content per bp:1.686
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif3.12%
Number of Background Sequences with motif525.1
Percentage of Background Sequences with motif1.14%
Average Position of motif in Targets50.7 +/- 26.0bp
Average Position of motif in Background49.1 +/- 30.7bp
Strand Bias (log2 ratio + to - strand density)-0.9
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-AGAGAGAGAG-
GAAAGTGAAAGT
 A C G T C T G A C T A G T G C A C T A G G C T A C T A G G T C A C T A G G T C A A C T G A C G T
T C A G C G T A T G C A C T G A C T A G C G A T C T A G G C T A T C G A C G T A A C T G A G C T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.58
Offset:1
Orientation:forward strand
Alignment:AGAGAGAGAG-
-GAGSCCGAGC
 C T G A C T A G T G C A C T A G G C T A C T A G G T C A C T A G G T C A A C T G A C G T
A C G T A C T G C G T A A C T G A T G C T G A C G A T C A T C G T G C A A C T G A G T C

PRDM1/MA0508.1/Jaspar

Match Rank:3
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--AGAGAGAGAG---
AGAAAGTGAAAGTGA
 A C G T A C G T C T G A C T A G T G C A C T A G G C T A C T A G G T C A C T A G G T C A A C T G A C G T A C G T A C G T
C G T A C T A G C T G A T C G A C T G A C T A G C A G T C T A G C G T A C T G A C G T A T C A G A C G T C T A G C T G A

PB0140.1_Irf6_2/Jaspar

Match Rank:4
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-AGAGAGAGAG----
NNNACCGAGAGTNNN
 A C G T C T G A C T A G T G C A C T A G G C T A C T A G G T C A C T A G G T C A A C T G A C G T A C G T A C G T A C G T
A T C G G A C T C A T G G T C A A G T C G A T C C T A G T C G A T A C G G T C A C A T G C G A T T C A G T A C G A C G T

PB0139.1_Irf5_2/Jaspar

Match Rank:5
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-AGAGAGAGAG----
TTGACCGAGAATTCC
 A C G T C T G A C T A G T G C A C T A G G C T A C T A G G T C A C T A G G T C A A C T G A C G T A C G T A C G T A C G T
A G C T G C A T C T A G C G T A G A C T G T A C C T A G C T G A A T C G C G T A C T G A G A C T G A C T A G T C T A G C

PB0114.1_Egr1_2/Jaspar

Match Rank:6
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---AGAGAGAGAG---
TGCGGAGTGGGACTGG
 A C G T A C G T A C G T C T G A C T A G T G C A C T A G G C T A C T A G G T C A C T A G G T C A A C T G A C G T A C G T A C G T
A C G T A C T G G A T C A C T G C T A G T C G A C T A G C A G T C T A G C A T G C A T G C G T A G A T C G C A T C T A G A C T G

IRF2/MA0051.1/Jaspar

Match Rank:7
Score:0.50
Offset:0
Orientation:forward strand
Alignment:AGAGAGAGAG--------
GGAAAGCGAAACCAAAAC
 C T G A C T A G T G C A C T A G G C T A C T A G G T C A C T A G G T C A A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A T C G C T A G C G T A C G T A C G T A C T A G A G C T A C T G C G T A C G T A C G T A A T C G A G T C C T G A C G T A C G T A G C T A G T A C

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:8
Score:0.50
Offset:0
Orientation:forward strand
Alignment:AGAGAGAGAG--
NGCGTGGGCGGR
 C T G A C T A G T G C A C T A G G C T A C T A G G T C A C T A G G T C A A C T G A C G T A C G T
A C G T T A C G G A T C A C T G A C G T C T A G A C T G A C T G G A T C C T A G C A T G C T A G

PB0009.1_E2F3_1/Jaspar

Match Rank:9
Score:0.49
Offset:-1
Orientation:forward strand
Alignment:-AGAGAGAGAG----
ATAAGGGCGCGCGAT
 A C G T C T G A C T A G T G C A C T A G G C T A C T A G G T C A C T A G G T C A A C T G A C G T A C G T A C G T A C G T
T C G A G C A T C G T A G C T A C T A G T A C G T A C G T A G C A T C G A T G C A T C G G A T C A T C G G C T A G C A T

PB0008.1_E2F2_1/Jaspar

Match Rank:10
Score:0.49
Offset:-1
Orientation:forward strand
Alignment:-AGAGAGAGAG----
ATAAAGGCGCGCGAT
 A C G T C T G A C T A G T G C A C T A G G C T A C T A G G T C A C T A G G T C A A C T G A C G T A C G T A C G T A C G T
C T G A G C A T C G T A G C T A C T G A T A C G A T C G T G A C A T C G A T G C A T C G G A T C T A C G G C T A G C A T