Information for 12-GACTGTGAGTTTS (Motif 20)

C T A G C G T A A T G C A C G T A T C G C A G T A C T G C G T A C T A G A C G T A G C T A C G T A T G C
Reverse Opposite:
A T C G C G T A C T G A C G T A A G T C A C G T A G T C G C T A A T G C C G T A A T C G A C G T A G T C
p-value:1e-9
log p-value:-2.073e+01
Information Content per bp:1.802
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.81%
Number of Background Sequences with motif6.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets60.3 +/- 28.0bp
Average Position of motif in Background58.6 +/- 18.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:1
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GACTGTGAGTTTS
-ACTTTCACTTTC
 C T A G C G T A A T G C A C G T A T C G C A G T A C T G C G T A C T A G A C G T A G C T A C G T A T G C
A C G T C T G A A T G C G A C T C G A T A G C T A G T C C G T A A T G C A C G T A C G T G A C T A G T C

Gfi1b/MA0483.1/Jaspar

Match Rank:2
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GACTGTGAGTTTS
TGCTGTGATTT--
 C T A G C G T A A T G C A C G T A T C G C A G T A C T G C G T A C T A G A C G T A G C T A C G T A T G C
C G A T C T A G G A T C G C A T A T C G C G A T A C T G T C G A A G C T A C G T A C G T A C G T A C G T

Gfi1/MA0038.1/Jaspar

Match Rank:3
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:GACTGTGAGTTTS
--CNGTGATTTN-
 C T A G C G T A A T G C A C G T A T C G C A G T A C T G C G T A C T A G A C G T A G C T A C G T A T G C
A C G T A C G T A T G C C G T A A T C G C G A T A C T G G C T A A C G T A C G T A C G T C T A G A C G T

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:4
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GACTGTGAGTTTS
-AGTTTCAGTTTC
 C T A G C G T A A T G C A C G T A T C G C A G T A C T G C G T A C T A G A C G T A G C T A C G T A T G C
A C G T C T G A A T C G A G C T A G C T A C G T T A G C C T G A T A C G C G A T A C G T G A C T A G T C

RELA/MA0107.1/Jaspar

Match Rank:5
Score:0.57
Offset:4
Orientation:forward strand
Alignment:GACTGTGAGTTTS-
----GGGAATTTCC
 C T A G C G T A A T G C A C G T A T C G C A G T A C T G C G T A C T A G A C G T A G C T A C G T A T G C A C G T
A C G T A C G T A C G T A C G T A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C

NFAT:AP1(RHD,bZIP)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:6
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GACTGTGAGTTTS-----
NTGACTCANTTTTTCCANTN
 A C G T A C G T C T A G C G T A A T G C A C G T A T C G C A G T A C T G C G T A C T A G A C G T A G C T A C G T A T G C A C G T A C G T A C G T A C G T A C G T
T C G A G C A T A C T G C G T A A T G C G C A T G T A C C G T A A G C T G C A T A G C T A G C T G A C T A G C T A G T C A G T C G C T A A G C T G A C T A T G C

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:7
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:GACTGTGAGTTTS-
----GGGAATTTCC
 C T A G C G T A A T G C A C G T A T C G C A G T A C T G C G T A C T A G A C G T A G C T A C G T A T G C A C G T
A C G T A C G T A C G T A C G T A C T G C T A G A C T G C T G A T C G A C G A T A G C T C G A T G T A C G T A C

IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer

Match Rank:8
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GACTGTGAGTTTS
-RSTTTCRSTTTC
 C T A G C G T A A T G C A C G T A T C G C A G T A C T G C G T A C T A G A C G T A G C T A C G T A T G C
A C G T T C G A A T G C A C G T A C G T A G C T A G T C C T G A A T G C G C A T G A C T A G C T G A T C

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:9
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:GACTGTGAGTTTS
-GCAGTGATTT--
 C T A G C G T A A T G C A C G T A T C G C A G T A C T G C G T A C T A G A C G T A G C T A C G T A T G C
A C G T C T A G A G T C G C T A A T C G C G A T A C T G T C G A A C G T A C G T A C G T A C G T A C G T

IRF1/MA0050.2/Jaspar

Match Rank:10
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---GACTGTGAGTTTS-----
TTTTACTTTCACTTTCACTTT
 A C G T A C G T A C G T C T A G C G T A A T G C A C G T A T C G C A G T A C T G C G T A C T A G A C G T A G C T A C G T A T G C A C G T A C G T A C G T A C G T A C G T
G A C T A G C T A G C T A G C T C T G A A T G C C G A T A G C T A G C T A G T C C T G A A T G C G C A T G A C T G A C T A G T C C G T A A G T C G A C T G C A T G A C T