Information for 7-GGGGAATTCC (Motif 12)

C A T G T C A G C T A G C T A G C T G A G C T A A C G T G A C T A G T C G T A C
Reverse Opposite:
C A T G T C A G C T G A T G C A C G A T G A C T G A T C G A T C A G T C G T A C
p-value:1e-10
log p-value:-2.532e+01
Information Content per bp:1.604
Number of Target Sequences with motif102.0
Percentage of Target Sequences with motif13.28%
Number of Background Sequences with motif2945.0
Percentage of Background Sequences with motif6.50%
Average Position of motif in Targets53.4 +/- 22.9bp
Average Position of motif in Background49.7 +/- 29.9bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:1
Score:0.89
Offset:-1
Orientation:forward strand
Alignment:-GGGGAATTCC-
NGGGGATTTCCC
 A C G T C A T G T C A G C T A G C T A G C T G A G C T A A C G T G A C T A G T C G T A C A C G T
C G T A C A T G C A T G A C T G C T A G T C G A G C A T C G A T A G C T A G T C G A T C G T A C

REL/MA0101.1/Jaspar

Match Rank:2
Score:0.84
Offset:0
Orientation:forward strand
Alignment:GGGGAATTCC
GGGGATTTCC
 C A T G T C A G C T A G C T A G C T G A G C T A A C G T G A C T A G T C G T A C
A T C G A C T G C A T G C T A G G T C A C G A T C G A T C G A T A G T C G T A C

MF0003.1_REL_class/Jaspar

Match Rank:3
Score:0.83
Offset:0
Orientation:forward strand
Alignment:GGGGAATTCC
GGGGATTTCC
 C A T G T C A G C T A G C T A G C T G A G C T A A C G T G A C T A G T C G T A C
A T C G A C T G C A T G C T A G G C T A C G A T A G C T G A C T G A T C G T A C

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:4
Score:0.83
Offset:0
Orientation:reverse strand
Alignment:GGGGAATTCC
GGGAATTTCC
 C A T G T C A G C T A G C T A G C T G A G C T A A C G T G A C T A G T C G T A C
A C T G C T A G A C T G C T G A T C G A C G A T A G C T C G A T G T A C G T A C

RELA/MA0107.1/Jaspar

Match Rank:5
Score:0.82
Offset:0
Orientation:forward strand
Alignment:GGGGAATTCC
GGGAATTTCC
 C A T G T C A G C T A G C T A G C T G A G C T A A C G T G A C T A G T C G T A C
A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C

NFKB2/MA0778.1/Jaspar

Match Rank:6
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-GGGGAATTCC--
AGGGGAATCCCCT
 A C G T C A T G T C A G C T A G C T A G C T G A G C T A A C G T G A C T A G T C G T A C A C G T A C G T
T C G A C T A G C A T G C A T G C T A G C T G A C G T A A C G T G A T C G T A C G T A C A G T C A C G T

MZF1/MA0056.1/Jaspar

Match Rank:7
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-GGGGAATTCC
TGGGGA-----
 A C G T C A T G T C A G C T A G C T A G C T G A G C T A A C G T G A C T A G T C G T A C
A G C T A C T G C T A G A C T G A C T G C T G A A C G T A C G T A C G T A C G T A C G T

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:8
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-GGGGAATTCC-
GGGGGAATCCCC
 A C G T C A T G T C A G C T A G C T A G C T G A G C T A A C G T G A C T A G T C G T A C A C G T
T C A G C T A G C T A G C T A G T C A G T C G A C T G A C G A T A G T C G A T C A G T C T G A C

PB0058.1_Sfpi1_1/Jaspar

Match Rank:9
Score:0.69
Offset:-4
Orientation:forward strand
Alignment:----GGGGAATTCC
TTAAGAGGAAGTTA
 A C G T A C G T A C G T A C G T C A T G T C A G C T A G C T A G C T G A G C T A A C G T G A C T A G T C G T A C
A G C T C G A T C G T A C G T A T C A G T C G A C T A G A C T G C G T A C G T A T A C G G A C T C G A T G T A C

NFKB1/MA0105.4/Jaspar

Match Rank:10
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-GGGGAATTCC--
AGGGGAATCCCCT
 A C G T C A T G T C A G C T A G C T A G C T G A G C T A A C G T G A C T A G T C G T A C A C G T A C G T
T G C A C T A G A T C G C A T G C T A G T C G A C G T A A G C T G A T C G T A C G T A C G A T C A C G T