Information for 6-CGGTAGAGCG (Motif 11)

A G T C A T C G A C T G A C G T C G T A A T C G C G T A A C T G G T A C A C T G
Reverse Opposite:
A G T C A C T G A G T C A C G T A T G C A C G T C G T A A G T C T A G C C T A G
p-value:1e-11
log p-value:-2.590e+01
Information Content per bp:1.880
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.91%
Number of Background Sequences with motif5.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets56.9 +/- 34.1bp
Average Position of motif in Background47.0 +/- 19.6bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CGGTAGAGCG
GRTGMTRGAGCC
 A C G T A C G T A G T C A T C G A C T G A C G T C G T A A T C G C G T A A C T G G T A C A C T G
A T C G T C G A G A C T A T C G T G A C A C G T C T A G A C T G C G T A A C T G A G T C G T A C

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:2
Score:0.59
Offset:2
Orientation:forward strand
Alignment:CGGTAGAGCG--
--BTBRAGTGSN
 A G T C A T C G A C T G A C G T C G T A A T C G C G T A A C T G G T A C A C T G A C G T A C G T
A C G T A C G T A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C

POL010.1_DCE_S_III/Jaspar

Match Rank:3
Score:0.58
Offset:5
Orientation:forward strand
Alignment:CGGTAGAGCG
-----CAGCC
 A G T C A T C G A C T G A C G T C G T A A T C G C G T A A C T G G T A C A C T G
A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C

PB0194.1_Zbtb12_2/Jaspar

Match Rank:4
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---CGGTAGAGCG--
TATCATTAGAACGCT
 A C G T A C G T A C G T A G T C A T C G A C T G A C G T C G T A A T C G C G T A A C T G G T A C A C T G A C G T A C G T
G C A T T G C A G A C T A T G C T C G A C G A T C A G T C T G A C A T G G C T A G T C A G T A C A C T G A G T C C G A T

PH0158.1_Rhox11_2/Jaspar

Match Rank:5
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---CGGTAGAGCG----
TCNCTTTACAGCGNNNT
 A C G T A C G T A C G T A G T C A T C G A C T G A C G T C G T A A T C G C G T A A C T G G T A C A C T G A C G T A C G T A C G T A C G T
C G A T A G T C A T G C G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G G A T C C T A G C A G T G T A C A G T C C G A T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:6
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:CGGTAGAGCG---
---TTGAGTGSTT
 A G T C A T C G A C T G A C G T C G T A A T C G C G T A A C T G G T A C A C T G A C G T A C G T A C G T
A C G T A C G T A C G T G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T

Rhox11/MA0629.1/Jaspar

Match Rank:7
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---CGGTAGAGCG----
TCNNTTTACAGCGNNNT
 A C G T A C G T A C G T A G T C A T C G A C T G A C G T C G T A A T C G C G T A A C T G G T A C A C T G A C G T A C G T A C G T A C G T
C G A T A G T C A T C G G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G A G T C C T A G A C G T G T A C A C G T G C A T

PH0157.1_Rhox11_1/Jaspar

Match Rank:8
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---CGGTAGAGCG----
TCNNTTTACAGCGNNNT
 A C G T A C G T A C G T A G T C A T C G A C T G A C G T C G T A A T C G C G T A A C T G G T A C A C T G A C G T A C G T A C G T A C G T
C G A T A G T C A T C G G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G A G T C C T A G A C G T G T A C A C G T G C A T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:9
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:CGGTAGAGCG---
--CTTGAGTGGCT
 A G T C A T C G A C T G A C G T C G T A A T C G C G T A A C T G G T A C A C T G A C G T A C G T A C G T
A C G T A C G T A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:10
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:CGGTAGAGCG--
--CTYRAGTGSY
 A G T C A T C G A C T G A C G T C G T A A T C G C G T A A C T G G T A C A C T G A C G T A C G T
A C G T A C G T A T G C G C A T A G C T C T A G C G T A A C T G C G A T C T A G A T G C G A T C