Information for 11-AAATATTTGA (Motif 18)

G T C A T G C A G C T A G C A T T C G A A G C T A C G T C G A T A T C G G T C A
Reverse Opposite:
C A G T T A G C G C T A T G C A T C G A A G C T C G T A C G A T A C G T C A G T
p-value:1e-8
log p-value:-1.854e+01
Information Content per bp:1.664
Number of Target Sequences with motif27.0
Percentage of Target Sequences with motif3.33%
Number of Background Sequences with motif421.0
Percentage of Background Sequences with motif0.88%
Average Position of motif in Targets44.6 +/- 26.8bp
Average Position of motif in Background49.0 +/- 28.5bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arid5a/MA0602.1/Jaspar

Match Rank:1
Score:0.75
Offset:-5
Orientation:reverse strand
Alignment:-----AAATATTTGA
NNTNNCAATATTAG-
 A C G T A C G T A C G T A C G T A C G T G T C A T G C A G C T A G C A T T C G A A G C T A C G T C G A T A T C G G T C A
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G A C G T

PB0002.1_Arid5a_1/Jaspar

Match Rank:2
Score:0.75
Offset:-5
Orientation:reverse strand
Alignment:-----AAATATTTGA
NNTNNCAATATTAG-
 A C G T A C G T A C G T A C G T A C G T G T C A T G C A G C T A G C A T T C G A A G C T A C G T C G A T A T C G G T C A
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G A C G T

MF0010.1_Homeobox_class/Jaspar

Match Rank:3
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:AAATATTTGA
AATTATT---
 G T C A T G C A G C T A G C A T T C G A A G C T A C G T C G A T A T C G G T C A
G C T A G C T A G A C T G A C T C G T A G C A T C G A T A C G T A C G T A C G T

FOXC1/MA0032.2/Jaspar

Match Rank:4
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----AAATATTTGA
TATGTAAATAT----
 A C G T A C G T A C G T A C G T A C G T G T C A T G C A G C T A G C A T T C G A A G C T A C G T C G A T A T C G G T C A
G C A T C T G A C G A T T C A G G C A T G T C A G T C A C T G A A G C T C T G A G C A T A C G T A C G T A C G T A C G T

FOXB1/MA0845.1/Jaspar

Match Rank:5
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----AAATATTTGA
TATGTAAATAT----
 A C G T A C G T A C G T A C G T A C G T G T C A T G C A G C T A G C A T T C G A A G C T A C G T C G A T A T C G G T C A
G C A T C T G A C G A T C T A G G A C T T G C A G C T A C G T A A G C T C T G A G C A T A C G T A C G T A C G T A C G T

Foxd3/MA0041.1/Jaspar

Match Rank:6
Score:0.58
Offset:0
Orientation:forward strand
Alignment:AAATATTTGA--
GAATGTTTGTTT
 G T C A T G C A G C T A G C A T T C G A A G C T A C G T C G A T A T C G G T C A A C G T A C G T
C T A G G C T A G C T A G A C T C T A G A C G T C G A T C A G T C T A G G A C T A C G T A G C T

FOXD2/MA0847.1/Jaspar

Match Rank:7
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--AAATATTTGA
GTAAACA-----
 A C G T A C G T G T C A T G C A G C T A G C A T T C G A A G C T A C G T C G A T A T C G G T C A
T C A G G A C T G T C A G T C A C G T A A G T C C T G A A C G T A C G T A C G T A C G T A C G T

Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer

Match Rank:8
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-AAATATTTGA--
TTAATGTTTAACC
 A C G T G T C A T G C A G C T A G C A T T C G A A G C T A C G T C G A T A T C G G T C A A C G T A C G T
A C G T G C A T C T G A G T C A G C A T T A C G C G A T C A G T G A C T G C T A C G T A G A T C G A T C

MF0005.1_Forkhead_class/Jaspar

Match Rank:9
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----AAATATTTGA
AAATAAACA-----
 A C G T A C G T A C G T A C G T G T C A T G C A G C T A G C A T T C G A A G C T A C G T C G A T A T C G G T C A
T C G A G T C A T C G A G A C T G T C A C T G A T C G A G A T C C G T A A C G T A C G T A C G T A C G T A C G T

PB0066.1_Sox17_1/Jaspar

Match Rank:10
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--AAATATTTGA---
ATAAACAATTAAACA
 A C G T A C G T G T C A T G C A G C T A G C A T T C G A A G C T A C G T C G A T A T C G G T C A A C G T A C G T A C G T
T G C A C G A T C T G A C G T A C G T A A G T C C G T A C G T A C G A T C G A T T C G A G C T A G C A T G A T C C G T A