Information for 10-CCCATAATGC (Motif 17)

T G A C G T A C A G T C C G T A A C G T T C G A G C T A C G A T A T C G G T A C
Reverse Opposite:
C A T G T A G C G C T A C G A T A G C T T G C A G C A T C T A G A C T G A C T G
p-value:1e-8
log p-value:-1.859e+01
Information Content per bp:1.667
Number of Target Sequences with motif35.0
Percentage of Target Sequences with motif4.31%
Number of Background Sequences with motif664.5
Percentage of Background Sequences with motif1.39%
Average Position of motif in Targets50.0 +/- 26.2bp
Average Position of motif in Background49.3 +/- 26.6bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF143/MA0088.2/Jaspar

Match Rank:1
Score:0.84
Offset:-2
Orientation:forward strand
Alignment:--CCCATAATGC----
TACCCACAATGCATTG
 A C G T A C G T T G A C G T A C A G T C C G T A A C G T T C G A G C T A C G A T A T C G G T A C A C G T A C G T A C G T A C G T
A G C T C G T A G T A C G T A C A G T C C T G A A G T C T C G A C T G A C G A T T C A G A G T C G T C A G A C T G A C T C T A G

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:2
Score:0.80
Offset:-4
Orientation:forward strand
Alignment:----CCCATAATGC-
ATTTCCCAGVAKSCY
 A C G T A C G T A C G T A C G T T G A C G T A C A G T C C G T A A C G T T C G A G C T A C G A T A T C G G T A C A C G T
T G C A G C A T A G C T G C A T A G T C A G T C A G T C C T G A A C T G T C G A T C G A C A G T A T C G A G T C G A T C

ZNF410/MA0752.1/Jaspar

Match Rank:3
Score:0.68
Offset:-5
Orientation:forward strand
Alignment:-----CCCATAATGC--
TCCATCCCATAATACTC
 A C G T A C G T A C G T A C G T A C G T T G A C G T A C A G T C C G T A A C G T T C G A G C T A C G A T A T C G G T A C A C G T A C G T
A C G T T G A C G A T C G C T A C A G T G T A C G T A C A T G C G T C A A G C T G T C A T C G A G A C T C T G A G T A C A G C T G T A C

Neurog1/MA0623.1/Jaspar

Match Rank:4
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CCCATAATGC
ACCATATGGT
 T G A C G T A C A G T C C G T A A C G T T C G A G C T A C G A T A T C G G T A C
T C G A T G A C G T A C C T G A A C G T T G C A G A C T A C T G A T C G G A C T

GSC2/MA0891.1/Jaspar

Match Rank:5
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CCCATAATGC--
--CCTAATCCGC
 T G A C G T A C A G T C C G T A A C G T T C G A G C T A C G A T A T C G G T A C A C G T A C G T
A C G T A C G T T G A C G A T C C G A T G C T A G C T A A C G T G T A C A G T C A T C G G A T C

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:6
Score:0.60
Offset:4
Orientation:forward strand
Alignment:CCCATAATGC--
----TAATCCCN
 T G A C G T A C A G T C C G T A A C G T T C G A G C T A C G A T A T C G G T A C A C G T A C G T
A C G T A C G T A C G T A C G T C G A T C T G A C G T A C A G T A G T C G A T C G A T C A C T G

GSC/MA0648.1/Jaspar

Match Rank:7
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CCCATAATGC--
--GCTAATCCCC
 T G A C G T A C A G T C C G T A A C G T T C G A G C T A C G A T A T C G G T A C A C G T A C G T
A C G T A C G T T A C G G A T C A G C T C T G A C G T A A C G T A G T C A G T C A T G C G A T C

PB0098.1_Zfp410_1/Jaspar

Match Rank:8
Score:0.59
Offset:-8
Orientation:reverse strand
Alignment:--------CCCATAATGC
NNNTCCATCCCATAANN-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G A C G T A C A G T C C G T A A C G T T C G A G C T A C G A T A T C G G T A C
A C G T G C A T G T C A A C G T T G A C G A T C G C T A A G C T G A T C G A T C G A T C C G T A C A G T G C T A G T C A A G C T G C T A A C G T

PITX3/MA0714.1/Jaspar

Match Rank:9
Score:0.59
Offset:2
Orientation:forward strand
Alignment:CCCATAATGC-
--CTTAATCCC
 T G A C G T A C A G T C C G T A A C G T T C G A G C T A C G A T A T C G G T A C A C G T
A C G T A C G T T A G C G A C T G C A T C T G A C T G A C A G T G T A C A G T C G A T C

HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer

Match Rank:10
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CCCATAATGC-
GGCCATAAATCA
 A C G T T G A C G T A C A G T C C G T A A C G T T C G A G C T A C G A T A T C G G T A C A C G T
C T A G T A C G A G T C G T A C T C G A A C G T G T C A G C T A G C T A C G A T A G T C G C T A