Information for 5-TGCAGCTGSAGCCHCT (Motif 4)

C G A T A C T G A G T C C G T A A T C G A G T C A C G T A C T G A T G C C T G A A C T G G T A C A T G C G A C T A G T C G A C T
Reverse Opposite:
C T G A T C A G C T G A A T C G A C T G A G T C A G C T A T C G A G T C C G T A A C T G A T G C C G A T C T A G G T A C G C T A
p-value:1e-12
log p-value:-2.982e+01
Information Content per bp:1.730
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.90%
Number of Background Sequences with motif5.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets45.2 +/- 13.1bp
Average Position of motif in Background27.3 +/- 15.8bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.69
Offset:1
Orientation:forward strand
Alignment:TGCAGCTGSAGCCHCT
-NCAGCTGCTG-----
 C G A T A C T G A G T C C G T A A T C G A G T C A C G T A C T G A T G C C T G A A C T G G T A C A T G C G A C T A G T C G A C T
A C G T T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G A C G T A C G T A C G T A C G T A C G T

PB0003.1_Ascl2_1/Jaspar

Match Rank:2
Score:0.68
Offset:-4
Orientation:reverse strand
Alignment:----TGCAGCTGSAGCCHCT
NNNNAGCAGCTGCTGAN---
 A C G T A C G T A C G T A C G T C G A T A C T G A G T C C G T A A T C G A G T C A C G T A C T G A T G C C T G A A C T G G T A C A T G C G A C T A G T C G A C T
G T A C C G T A C T A G A C G T T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T C A G T G C A T C A G A C G T A C G T A C G T

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:3
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-TGCAGCTGSAGCCHCT
NNACAGCTGC-------
 A C G T C G A T A C T G A G T C C G T A A T C G A G T C A C G T A C T G A T G C C T G A A C T G G T A C A T G C G A C T A G T C G A C T
C G T A T G A C T C G A A G T C C G T A A T C G A T G C A C G T A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:4
Score:0.67
Offset:0
Orientation:forward strand
Alignment:TGCAGCTGSAGCCHCT
AGCAGCTGCTNN----
 C G A T A C T G A G T C C G T A A T C G A G T C A C G T A C T G A T G C C T G A A C T G G T A C A T G C G A C T A G T C G A C T
C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A T C G A G T C A C G T A C G T A C G T A C G T

NHLH1/MA0048.2/Jaspar

Match Rank:5
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:TGCAGCTGSAGCCHCT
CGCAGCTGCG------
 C G A T A C T G A G T C C G T A A T C G A G T C A C G T A C T G A T G C C T G A A C T G G T A C A T G C G A C T A G T C G A C T
T G A C C T A G A T G C T C G A A T C G T A G C A C G T A C T G A G T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T

Myod1/MA0499.1/Jaspar

Match Rank:6
Score:0.66
Offset:0
Orientation:forward strand
Alignment:TGCAGCTGSAGCCHCT
TGCAGCTGTCCCT---
 C G A T A C T G A G T C C G T A A T C G A G T C A C G T A C T G A T G C C T G A A C T G G T A C A T G C G A C T A G T C G A C T
G C A T T A C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C T A G C A G T C A G C T A C G T A C G T A C G T

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:7
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----TGCAGCTGSAGCCHCT
NNTNCGCACCTGTNGAN---
 A C G T A C G T A C G T A C G T C G A T A C T G A G T C C G T A A T C G A G T C A C G T A C T G A T G C C T G A A C T G G T A C A T G C G A C T A G T C G A C T
G C A T C A G T G C A T A G C T G A T C T C A G G T A C C T G A A T G C T A G C A C G T A C T G A C G T C A T G C A T G G T C A A G C T A C G T A C G T A C G T

Myog/MA0500.1/Jaspar

Match Rank:8
Score:0.66
Offset:0
Orientation:forward strand
Alignment:TGCAGCTGSAGCCHCT
GACAGCTGCAG-----
 C G A T A C T G A G T C C G T A A T C G A G T C A C G T A C T G A T G C C T G A A C T G G T A C A T G C G A C T A G T C G A C T
T C A G T C G A A G T C C G T A A C T G T A G C A C G T A C T G T A G C C T G A T A C G A C G T A C G T A C G T A C G T A C G T

TCF4/MA0830.1/Jaspar

Match Rank:9
Score:0.66
Offset:0
Orientation:forward strand
Alignment:TGCAGCTGSAGCCHCT
CGCACCTGCT------
 C G A T A C T G A G T C C G T A A T C G A G T C A C G T A C T G A T G C C T G A A C T G G T A C A T G C G A C T A G T C G A C T
G A T C T C A G G A T C C G T A A T G C T A G C C G A T C T A G A T G C C G A T A C G T A C G T A C G T A C G T A C G T A C G T

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:10
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:TGCAGCTGSAGCCHCT
NVCAGCTGBBNN----
 C G A T A C T G A G T C C G T A A T C G A G T C A C G T A C T G A T G C C T G A A C T G G T A C A T G C G A C T A G T C G A C T
T C G A T A C G G T A C C G T A A T C G T G A C C G A T A C T G A T G C A T G C T C A G G A T C A C G T A C G T A C G T A C G T