Information for 2-RSACAGGTGTRSV (Motif 2)

C T A G T A G C T G C A A G T C C G T A A T C G A C T G A C G T C T A G G C A T C T A G A T G C T A C G
Reverse Opposite:
A T G C T A C G G A T C C G T A A G T C C G T A A G T C A T G C A C G T A C T G A C G T A T C G G A T C
p-value:1e-33
log p-value:-7.625e+01
Information Content per bp:1.655
Number of Target Sequences with motif205.0
Percentage of Target Sequences with motif23.14%
Number of Background Sequences with motif4518.9
Percentage of Background Sequences with motif9.36%
Average Position of motif in Targets49.6 +/- 24.8bp
Average Position of motif in Background50.2 +/- 29.5bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.31
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:1
Score:0.95
Offset:1
Orientation:reverse strand
Alignment:RSACAGGTGTRSV
-NNCAGGTGNN--
 C T A G T A G C T G C A A G T C C G T A A T C G A C T G A C G T C T A G G C A T C T A G A T G C T A C G
A C G T C A G T T A C G A G T C C G T A A C T G A C T G A C G T A C T G A C G T T A C G A C G T A C G T

ID4/MA0824.1/Jaspar

Match Rank:2
Score:0.95
Offset:1
Orientation:reverse strand
Alignment:RSACAGGTGTRSV
-GACAGGTGTN--
 C T A G T A G C T G C A A G T C C G T A A T C G A C T G A C G T C T A G G C A T C T A G A T G C T A C G
A C G T C T A G T C G A A G T C C G T A A T C G A T C G A G C T A C T G A G C T G T C A A C G T A C G T

TCF4/MA0830.1/Jaspar

Match Rank:3
Score:0.94
Offset:1
Orientation:reverse strand
Alignment:RSACAGGTGTRSV
-NNCAGGTGCG--
 C T A G T A G C T G C A A G T C C G T A A T C G A C T G A C G T C T A G G C A T C T A G A T G C T A C G
A C G T G C T A T A C G G A T C C G T A A T C G T A C G A C G T C T A G A G T C C T A G A C G T A C G T

TCF3/MA0522.2/Jaspar

Match Rank:4
Score:0.94
Offset:1
Orientation:reverse strand
Alignment:RSACAGGTGTRSV
-NNCAGGTGTN--
 C T A G T A G C T G C A A G T C C G T A A T C G A C T G A C G T C T A G G C A T C T A G A T G C T A C G
A C G T G T C A T C A G A G T C C G T A A T C G T A C G C G A T A C T G A G C T C A G T A C G T A C G T

SNAI2/MA0745.1/Jaspar

Match Rank:5
Score:0.93
Offset:1
Orientation:forward strand
Alignment:RSACAGGTGTRSV
-AACAGGTGT---
 C T A G T A G C T G C A A G T C C G T A A T C G A C T G A C G T C T A G G C A T C T A G A T G C T A C G
A C G T C T G A C T G A G T A C G C T A C T A G C T A G G A C T C A T G A G C T A C G T A C G T A C G T

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:6
Score:0.93
Offset:2
Orientation:forward strand
Alignment:RSACAGGTGTRSV
--VCAGGTRDRY-
 C T A G T A G C T G C A A G T C C G T A A T C G A C T G A C G T C T A G G C A T C T A G A T G C T A C G
A C G T A C G T T G C A G T A C C G T A A T C G A C T G A C G T C T A G C G A T T C G A A G T C A C G T

ZEB1/MA0103.2/Jaspar

Match Rank:7
Score:0.93
Offset:3
Orientation:reverse strand
Alignment:RSACAGGTGTRSV
---CAGGTGAGG-
 C T A G T A G C T G C A A G T C C G T A A T C G A C T G A C G T C T A G G C A T C T A G A T G C T A C G
A C G T A C G T A C G T A G T C C G T A A C T G A C T G A C G T C T A G G C T A C T A G A C T G A C G T

FIGLA/MA0820.1/Jaspar

Match Rank:8
Score:0.91
Offset:1
Orientation:reverse strand
Alignment:RSACAGGTGTRSV
-AACAGGTGNT--
 C T A G T A G C T G C A A G T C C G T A A T C G A C T G A C G T C T A G G C A T C T A G A T G C T A C G
A C G T G C T A T G C A G T A C G C T A A T C G A T C G C A G T C T A G C A T G C G A T A C G T A C G T

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:9
Score:0.88
Offset:-2
Orientation:forward strand
Alignment:--RSACAGGTGTRSV--
ATCCACAGGTGCGAAAA
 A C G T A C G T C T A G T A G C T G C A A G T C C G T A A T C G A C T G A C G T C T A G G C A T C T A G A T G C T A C G A C G T A C G T
T C G A A C G T G T A C G T A C T G C A G T A C G T C A A T C G T A C G A G C T A C T G A G T C C T A G T C G A C G T A G T C A C G T A

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:10
Score:0.88
Offset:0
Orientation:reverse strand
Alignment:RSACAGGTGTRSV
SDGCAGGTGCNS-
 C T A G T A G C T G C A A G T C C G T A A T C G A C T G A C G T C T A G G C A T C T A G A T G C T A C G
A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C A C G T