Information for 8-CTGTGGGTTTTGT (Motif 15)

G T A C A C G T A C T G A C G T A C T G A C T G T A C G A C G T A C G T A C G T A C G T A C T G A C G T
Reverse Opposite:
C G T A A G T C C G T A C G T A G T C A C G T A A T G C A G T C A G T C C G T A A G T C G T C A A C T G
p-value:1e-8
log p-value:-1.934e+01
Information Content per bp:1.932
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.56%
Number of Background Sequences with motif3.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets42.6 +/- 22.1bp
Average Position of motif in Background43.7 +/- 7.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX1/MA0002.2/Jaspar

Match Rank:1
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--CTGTGGGTTTTGT
GTCTGTGGTTT----
 A C G T A C G T G T A C A C G T A C T G A C G T A C T G A C T G T A C G A C G T A C G T A C G T A C G T A C T G A C G T
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T A C G T A C G T A C G T A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:2
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-CTGTGGGTTTTGT
NNTGTGGTTT----
 A C G T G T A C A C G T A C T G A C G T A C T G A C T G T A C G A C G T A C G T A C G T A C G T A C T G A C G T
A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T A C G T A C G T A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-CTGTGGGTTTTGT
GCTGTGGTTT----
 A C G T G T A C A C G T A C T G A C G T A C T G A C T G T A C G A C G T A C G T A C G T A C G T A C T G A C G T
A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T A C G T A C G T A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:4
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--CTGTGGGTTTTGT
NNHTGTGGTTWN---
 A C G T A C G T G T A C A C G T A C T G A C G T A C T G A C T G T A C G A C G T A C G T A C G T A C G T A C T G A C G T
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G A C G T A C G T A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:5
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CTGTGGGTTTTGT
CTGTGGTTTN---
 G T A C A C G T A C T G A C G T A C T G A C T G T A C G A C G T A C G T A C G T A C G T A C T G A C G T
G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G A C G T A C G T A C G T

FOXH1/MA0479.1/Jaspar

Match Rank:6
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:CTGTGGGTTTTGT
-TGTGGATTNNN-
 G T A C A C G T A C T G A C G T A C T G A C T G T A C G A C G T A C G T A C G T A C G T A C T G A C G T
A C G T C G A T A C T G A C G T A C T G C A T G C G T A G C A T A C G T A T C G T C A G T C G A A C G T

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CTGTGGGTTTTGT
NNTGTGGATTSS--
 A C G T G T A C A C G T A C T G A C G T A C T G A C T G T A C G A C G T A C G T A C G T A C G T A C T G A C G T
C A T G G A C T G C A T A C T G A G C T A C T G A C T G C G T A G C A T A G C T A T C G T A C G A C G T A C G T

ZNF354C/MA0130.1/Jaspar

Match Rank:8
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:CTGTGGGTTTTGT
--GTGGAT-----
 G T A C A C G T A C T G A C G T A C T G A C T G T A C G A C G T A C G T A C G T A C G T A C T G A C G T
A C G T A C G T A T C G A C G T A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:9
Score:0.55
Offset:1
Orientation:forward strand
Alignment:CTGTGGGTTTTGT
-AGGVNCCTTTGT
 G T A C A C G T A C T G A C G T A C T G A C T G T A C G A C G T A C G T A C G T A C G T A C T G A C G T
A C G T C G T A C T A G T C A G T C A G A G T C A T G C A G T C G C A T A G C T A C G T A T C G C G A T

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:10
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CTGTGGGTTTTGT--
NNTGTTTATTTTGGCA
 A C G T G T A C A C G T A C T G A C G T A C T G A C T G T A C G A C G T A C G T A C G T A C G T A C T G A C G T A C G T A C G T
C G A T G A C T C G A T T C A G G A C T A C G T C A G T C T G A G A C T G A C T A G C T C G A T A C T G A T C G G T A C G C T A