Information for 4-TTTCATTKTGRWGATT (Motif 5)

C G A T A C G T C G A T A G T C C G T A C G A T C A G T C A G T C G A T T A C G T C G A C G T A T C A G C G T A A C G T A C G T
Reverse Opposite:
T G C A T G C A C G A T A G T C G C A T A G C T A T G C C G T A G T C A G T C A G C T A A C G T A C T G G C T A T G C A C G T A
p-value:1e-14
log p-value:-3.315e+01
Information Content per bp:1.607
Number of Target Sequences with motif30.0
Percentage of Target Sequences with motif4.01%
Number of Background Sequences with motif300.1
Percentage of Background Sequences with motif0.63%
Average Position of motif in Targets54.0 +/- 21.6bp
Average Position of motif in Background50.2 +/- 28.6bp
Strand Bias (log2 ratio + to - strand density)-0.9
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:1
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--TTTCATTKTGRWGATT
ACTTTCACTTTC------
 A C G T A C G T C G A T A C G T C G A T A G T C C G T A C G A T C A G T C A G T C G A T T A C G T C G A C G T A T C A G C G T A A C G T A C G T
C T G A A T G C G A C T C G A T A G C T A G T C C G T A A T G C A C G T A C G T G A C T A G T C A C G T A C G T A C G T A C G T A C G T A C G T

IRF7/MA0772.1/Jaspar

Match Rank:2
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--TTTCATTKTGRWGATT
ANTTTCGCTTTCGN----
 A C G T A C G T C G A T A C G T C G A T A G T C C G T A C G A T C A G T C A G T C G A T T A C G T C G A C G T A T C A G C G T A A C G T A C G T
C G T A A G T C C G A T A C G T C A G T G A T C C T A G A G T C A C G T C G A T A C G T T G A C A C T G C A G T A C G T A C G T A C G T A C G T

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:3
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--TTTCATTKTGRWGATT
AGTTTCAGTTTC------
 A C G T A C G T C G A T A C G T C G A T A G T C C G T A C G A T C A G T C A G T C G A T T A C G T C G A C G T A T C A G C G T A A C G T A C G T
C T G A A T C G A G C T A G C T A C G T T A G C C T G A T A C G C G A T A C G T G A C T A G T C A C G T A C G T A C G T A C G T A C G T A C G T

bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer

Match Rank:4
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---TTTCATTKTGRWGATT
NAGTTTCABTHTGACTNW-
 A C G T A C G T A C G T C G A T A C G T C G A T A G T C C G T A C G A T C A G T C A G T C G A T T A C G T C G A C G T A T C A G C G T A A C G T A C G T
A G T C C T G A A T C G A G C T A G C T G A C T A G T C G C T A A C G T C G A T G C A T C G A T A T C G C G T A T A G C G C A T A T G C C G T A A C G T

IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:5
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TTTCATTKTGRWGATT
CTTTCANTATGACTV--
 A C G T C G A T A C G T C G A T A G T C C G T A C G A T C A G T C A G T C G A T T A C G T C G A C G T A T C A G C G T A A C G T A C G T
A T G C G A C T A G C T A G C T A G T C G C T A C A G T C G A T G C T A A C G T A C T G G C T A T A G C G C A T T G A C A C G T A C G T

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:6
Score:0.57
Offset:0
Orientation:forward strand
Alignment:TTTCATTKTGRWGATT
TGTCANYT--------
 C G A T A C G T C G A T A G T C C G T A C G A T C A G T C A G T C G A T T A C G T C G A C G T A T C A G C G T A A C G T A C G T
A G C T C A T G G C A T G A T C T G C A C T A G G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

IRF1/MA0050.2/Jaspar

Match Rank:7
Score:0.57
Offset:-6
Orientation:forward strand
Alignment:------TTTCATTKTGRWGATT
TTTTACTTTCACTTTCACTTT-
 A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C G T C G A T A G T C C G T A C G A T C A G T C A G T C G A T T A C G T C G A C G T A T C A G C G T A A C G T A C G T
G A C T A G C T A G C T A G C T C T G A A T G C C G A T A G C T A G C T A G T C C T G A A T G C G C A T G A C T G A C T A G T C C G T A A G T C G A C T G C A T G A C T A C G T

Sox17/MA0078.1/Jaspar

Match Rank:8
Score:0.56
Offset:1
Orientation:forward strand
Alignment:TTTCATTKTGRWGATT
-CTCATTGTC------
 C G A T A C G T C G A T A G T C C G T A C G A T C A G T C A G T C G A T T A C G T C G A C G T A T C A G C G T A A C G T A C G T
A C G T G A C T G A C T G A T C C G T A A G C T A C G T A C T G A C G T A T G C A C G T A C G T A C G T A C G T A C G T A C G T

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:9
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-TTTCATTKTGRWGATT
YTGWCADY---------
 A C G T C G A T A C G T C G A T A G T C C G T A C G A T C A G T C A G T C G A T T A C G T C G A C G T A T C A G C G T A A C G T A C G T
G A C T G C A T C T A G C G A T G A T C T C G A C A T G G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POL002.1_INR/Jaspar

Match Rank:10
Score:0.55
Offset:2
Orientation:forward strand
Alignment:TTTCATTKTGRWGATT
--TCAGTCTT------
 C G A T A C G T C G A T A G T C C G T A C G A T C A G T C A G T C G A T T A C G T C G A C G T A T C A G C G T A A C G T A C G T
A C G T A C G T C A G T A G T C C G T A A T C G G A C T G A T C A G C T A G C T A C G T A C G T A C G T A C G T A C G T A C G T