Information for 19-CGCGTTTGTG (Motif 47)

T G A C T C A G T G A C T C A G C A G T C A G T A G C T A T C G A G C T T C A G
Reverse Opposite:
A G T C T C G A A T G C C T G A G T C A G T C A A G T C A C T G A G T C A C T G
p-value:1e-4
log p-value:-9.736e+00
Information Content per bp:1.612
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif2.94%
Number of Background Sequences with motif535.1
Percentage of Background Sequences with motif1.12%
Average Position of motif in Targets56.5 +/- 26.7bp
Average Position of motif in Background46.8 +/- 32.8bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.27
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0130.1_Gm397_2/Jaspar

Match Rank:1
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-CGCGTTTGTG-----
NNGCGTGTGTGCNGCN
 A C G T T G A C T C A G T G A C T C A G C A G T C A G T A G C T A T C G A G C T T C A G A C G T A C G T A C G T A C G T A C G T
C A G T A C G T C T A G T G A C C A T G A C G T T A C G A G C T C A T G A G C T A C T G A G T C A G T C C A T G A G T C G A C T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:2
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:CGCGTTTGTG-----
---NNHTGTGGTTWN
 T G A C T C A G T G A C T C A G C A G T C A G T A G C T A T C G A G C T T C A G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

PB0168.1_Sox14_2/Jaspar

Match Rank:3
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CGCGTTTGTG----
NNNCCATTGTGTNAN
 A C G T T G A C T C A G T G A C T C A G C A G T C A G T A G C T A T C G A G C T T C A G A C G T A C G T A C G T A C G T
A T C G T G A C A C T G A G T C G A T C C G T A A C G T A C G T T A C G G C A T A T C G A G C T T C A G T G C A T C A G

PB0151.1_Myf6_2/Jaspar

Match Rank:4
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CGCGTTTGTG---
GGNGCGNCTGTTNNN
 A C G T A C G T T G A C T C A G T G A C T C A G C A G T C A G T A G C T A T C G A G C T T C A G A C G T A C G T A C G T
C T A G A C T G G A C T A T C G A T G C A T C G A C T G G A T C A G C T C T A G A C G T A G C T A C T G A T G C A G C T

RUNX1/MA0002.2/Jaspar

Match Rank:5
Score:0.59
Offset:3
Orientation:forward strand
Alignment:CGCGTTTGTG----
---GTCTGTGGTTT
 T G A C T C A G T G A C T C A G C A G T C A G T A G C T A T C G A G C T T C A G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CGCGTTTGTG
VBSYGTCTGG-
 A C G T T G A C T C A G T G A C T C A G C A G T C A G T A G C T A T C G A G C T T C A G
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:7
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CGCGTTTGTG--
--CCATTGTTNY
 T G A C T C A G T G A C T C A G C A G T C A G T A G C T A T C G A G C T T C A G A C G T A C G T
A C G T A C G T A T G C G T A C C G T A A G C T G C A T T A C G A G C T A G C T A G T C A G C T

KLF10(Zf)/HEK293-KLF10.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CGCGTTTGTG---
-GGGGGTGTGTCC
 T G A C T C A G T G A C T C A G C A G T C A G T A G C T A T C G A G C T T C A G A C G T A C G T A C G T
A C G T T C A G C A T G C A T G A C T G A C T G A G C T A C T G A C G T A C T G C A G T A T G C A G T C

POL002.1_INR/Jaspar

Match Rank:9
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CGCGTTTGTG
-NNNANTGA-
 T G A C T C A G T G A C T C A G C A G T C A G T A G C T A T C G A G C T T C A G
A C G T T C G A T C G A C T A G C T G A T A G C C G A T A C T G G T C A A C G T

NRF1/MA0506.1/Jaspar

Match Rank:10
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CGCGTTTGTG--
-GCGCCTGCGCA
 T G A C T C A G T G A C T C A G C A G T C A G T A G C T A T C G A G C T T C A G A C G T A C G T
A C G T T C A G G T A C T C A G A T G C T G A C A C G T A C T G A G T C A T C G G T A C T C G A