p-value: | 1e-6 |
log p-value: | -1.427e+01 |
Information Content per bp: | 1.530 |
Number of Target Sequences with motif | 3.0 |
Percentage of Target Sequences with motif | 0.40% |
Number of Background Sequences with motif | 1.0 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 54.3 +/- 20.2bp |
Average Position of motif in Background | 78.0 +/- 0.0bp |
Strand Bias (log2 ratio + to - strand density) | 1.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer
Match Rank: | 1 |
Score: | 0.62 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | CGAAACACTTTAT --MRSCACTYAA- |
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Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer
Match Rank: | 2 |
Score: | 0.61 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | CGAAACACTTTAT --AAGCACTTAA- |
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PB0175.1_Sox4_2/Jaspar
Match Rank: | 3 |
Score: | 0.61 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --CGAAACACTTTAT-- TNCNNAACAATTTTTNC |
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PB0066.1_Sox17_1/Jaspar
Match Rank: | 4 |
Score: | 0.61 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | CGAAACACTTTAT-- ATAAACAATTAAACA |
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NKX3-2/MA0122.2/Jaspar
Match Rank: | 5 |
Score: | 0.59 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | CGAAACACTTTAT ---ACCACTTAA- |
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Nkx3-1/MA0124.2/Jaspar
Match Rank: | 6 |
Score: | 0.58 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | CGAAACACTTTAT ---ACCACTTAA- |
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PB0165.1_Sox11_2/Jaspar
Match Rank: | 7 |
Score: | 0.57 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --CGAAACACTTTAT NNCNNAACAATTNT- |
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DMRT6(DM)/Testis-DMRT6-ChIP-Seq(GSE60440)/Homer
Match Rank: | 8 |
Score: | 0.57 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | CGAAACACTTTAT--- -GHTACAWTGTADCHR |
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NKX2-3/MA0672.1/Jaspar
Match Rank: | 9 |
Score: | 0.57 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | CGAAACACTTTAT ---ACCACTTGAA |
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Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer
Match Rank: | 10 |
Score: | 0.57 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | CGAAACACTTTAT --AASCACTCAA- |
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