Information for 20-CTTTAAAGGGAGC (Motif 37)

A G T C C G A T G A C T G A C T C G T A C G T A C G T A A C T G A C T G C T A G C G T A A T C G A G T C
Reverse Opposite:
C T A G A T G C C G A T A G T C A G T C A G T C C G A T A C G T C G A T C G T A C G T A C G T A C T A G
p-value:1e-8
log p-value:-1.904e+01
Information Content per bp:1.766
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.60%
Number of Background Sequences with motif76.3
Percentage of Background Sequences with motif0.16%
Average Position of motif in Targets40.8 +/- 14.7bp
Average Position of motif in Background49.4 +/- 26.1bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TATA-Box(TBP)/Promoter/Homer

Match Rank:1
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--CTTTAAAGGGAGC
GNCTATAAAAGG---
 A C G T A C G T A G T C C G A T G A C T G A C T C G T A C G T A C G T A A C T G A C T G C T A G C G T A A T C G A G T C
A T C G A T C G A T G C A G C T G C T A A C G T C G T A C G T A C T G A C T G A C T A G T A C G A C G T A C G T A C G T

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:2
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-CTTTAAAGGGAGC
ACWTCAAAGG----
 A C G T A G T C C G A T G A C T G A C T C G T A C G T A C G T A A C T G A C T G C T A G C G T A A T C G A G T C
C G T A A T G C C G A T A C G T A G T C C G T A C G T A C G T A C T A G A T C G A C G T A C G T A C G T A C G T

PB0184.1_Tbp_2/Jaspar

Match Rank:3
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CTTTAAAGGGAGC
CCGATTTAAGCGACC
 A C G T A C G T A G T C C G A T G A C T G A C T C G T A C G T A C G T A A C T G A C T G C T A G C G T A A T C G A G T C
T G A C A T G C A T C G C G T A G A C T C G A T C G A T G T C A G C T A A T C G T A G C A C T G G C T A A C G T G T A C

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:4
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CTTTAAAGGGAGC
ACATCAAAGG----
 A C G T A G T C C G A T G A C T G A C T C G T A C G T A C G T A A C T G A C T G C T A G C G T A A T C G A G T C
C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T

TCF7L2/MA0523.1/Jaspar

Match Rank:5
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---CTTTAAAGGGAGC
AAAGATCAAAGGAA--
 A C G T A C G T A C G T A G T C C G A T G A C T G A C T C G T A C G T A C G T A A C T G A C T G C T A G C G T A A T C G A G T C
C T G A T C G A C T G A A T C G G C T A C G A T T A G C C G T A T C G A C T G A T C A G T C A G T C G A G T C A A C G T A C G T

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:6
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CTTTAAAGGGAGC
ACATCAAAGGNA--
 A C G T A G T C C G A T G A C T G A C T C G T A C G T A C G T A A C T G A C T G C T A G C G T A A T C G A G T C
C T G A A T G C G C T A G C A T A T G C C G T A T C G A C T G A C T A G T C A G T A C G G T C A A C G T A C G T

PB0078.1_Srf_1/Jaspar

Match Rank:7
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---CTTTAAAGGGAGC
TTCCATATATGGAA--
 A C G T A C G T A C G T A G T C C G A T G A C T G A C T C G T A C G T A C G T A A C T G A C T G C T A G C G T A A T C G A G T C
G C A T C G A T G T A C A G T C C G T A C G A T C G T A G C A T C G T A G C A T C T A G C A T G G C A T G T C A A C G T A C G T

CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan_et_al.)/Homer

Match Rank:8
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CTTTAAAGGGAGC
CCATATATGGNA--
 A C G T A G T C C G A T G A C T G A C T C G T A C G T A C G T A A C T G A C T G C T A G C G T A A T C G A G T C
A T G C A G T C G C T A C G A T C G T A G C A T G C T A C G A T C T A G C A T G T G A C G T C A A C G T A C G T

Bcl6/MA0463.1/Jaspar

Match Rank:9
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CTTTAAAGGGAGC
NGCTTTCTAGGAAN-
 A C G T A C G T A G T C C G A T G A C T G A C T C G T A C G T A C G T A A C T G A C T G C T A G C G T A A T C G A G T C
C G A T C A T G G T A C G A C T A G C T G A C T A G T C A G C T C G T A C T A G C A T G T C G A G C T A G T C A A C G T

Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer

Match Rank:10
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CTTTAAAGGGAGC
-TTTAATTGCN--
 A G T C C G A T G A C T G A C T C G T A C G T A C G T A A C T G A C T G C T A G C G T A A T C G A G T C
A C G T C G A T A G C T C G A T G C T A C G T A G A C T C A G T C T A G T A G C A T G C A C G T A C G T