Information for 7-BTCCCCCTAGTGG (Motif 13)

A G T C A C G T A G T C A G T C A G T C A G T C A G T C A C G T C G T A C T A G A C G T A C T G A C T G
Reverse Opposite:
A G T C A G T C C G T A A G T C A C G T C G T A C T A G C T A G C T A G A C T G A C T G C G T A T A C G
p-value:1e-13
log p-value:-3.154e+01
Information Content per bp:1.851
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.80%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets59.3 +/- 26.7bp
Average Position of motif in Background9.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CTCF/MA0139.1/Jaspar

Match Rank:1
Score:0.74
Offset:-3
Orientation:reverse strand
Alignment:---BTCCCCCTAGTGG---
TAGCGCCCCCTGGTGGCCA
 A C G T A C G T A C G T A G T C A C G T A G T C A G T C A G T C A G T C A G T C A C G T C G T A C T A G A C G T A C T G A C T G A C G T A C G T A C G T
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.73
Offset:-6
Orientation:forward strand
Alignment:------BTCCCCCTAGTGG-
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T A G T C A G T C A G T C A G T C A G T C A C G T C G T A C T A G A C G T A C T G A C T G A C G T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.72
Offset:-4
Orientation:forward strand
Alignment:----BTCCCCCTAGTGG---
ANAGTGCCACCTGGTGGCCA
 A C G T A C G T A C G T A C G T A G T C A C G T A G T C A G T C A G T C A G T C A G T C A C G T C G T A C T A G A C G T A C T G A C T G A C G T A C G T A C G T
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

MZF1(var.2)/MA0057.1/Jaspar

Match Rank:4
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:BTCCCCCTAGTGG
TTCCCCCTAC---
 A G T C A C G T A G T C A G T C A G T C A G T C A G T C A C G T C G T A C T A G A C G T A C T G A C T G
A G C T G A C T G T A C G T A C A T G C G T A C G T A C A C G T G T A C T A G C A C G T A C G T A C G T

Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer

Match Rank:5
Score:0.59
Offset:6
Orientation:forward strand
Alignment:BTCCCCCTAGTGG-
------CTAATKGV
 A G T C A C G T A G T C A G T C A G T C A G T C A G T C A C G T C G T A C T A G A C G T A C T G A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G A T C T G A C G T A A C G T C A G T T C A G T G A C

MZF1/MA0056.1/Jaspar

Match Rank:6
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:BTCCCCCTAGTGG
-TCCCCA------
 A G T C A C G T A G T C A G T C A G T C A G T C A G T C A C G T C G T A C T A G A C G T A C T G A C T G
A C G T A G C T A G T C G T A C A G T C G T A C T C G A A C G T A C G T A C G T A C G T A C G T A C G T

PB0135.1_Hoxa3_2/Jaspar

Match Rank:7
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:BTCCCCCTAGTGG-----
----CCTTAATNGNTTTT
 A G T C A C G T A G T C A G T C A G T C A G T C A G T C A C G T C G T A C T A G A C G T A C T G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G T C A T G C G A C T C G A T C G T A C G T A A C G T T C A G A C T G G C A T C G A T G A C T C A G T A G C T

BARX1/MA0875.1/Jaspar

Match Rank:8
Score:0.57
Offset:6
Orientation:reverse strand
Alignment:BTCCCCCTAGTGG-
------NTAATTGN
 A G T C A C G T A G T C A G T C A G T C A G T C A G T C A C G T C G T A C T A G A C G T A C T G A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T C G T A C G T A A C G T A C G T C T A G A G T C

VENTX/MA0724.1/Jaspar

Match Rank:9
Score:0.56
Offset:6
Orientation:reverse strand
Alignment:BTCCCCCTAGTGG--
------CTAATCGNT
 A G T C A C G T A G T C A G T C A G T C A G T C A G T C A C G T C G T A C T A G A C G T A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A T C A C G T C G T A C G T A C A G T A G T C C T A G A C T G G C A T

NKX2-3/MA0672.1/Jaspar

Match Rank:10
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:BTCCCCCTAGTGG-
----NTCAAGTGGN
 A G T C A C G T A G T C A G T C A G T C A G T C A G T C A C G T C G T A C T A G A C G T A C T G A C T G A C G T
A C G T A C G T A C G T A C G T A G C T G C A T A G T C C T G A G T C A A C T G C G A T C T A G A T C G A C G T