Information for 5-TTCARTGTYYMGT (Motif 6)

A C G T A C G T A G T C C G T A C T A G A G C T A C T G A C G T A G T C A G C T G T C A A C T G A C G T
Reverse Opposite:
C G T A A G T C A C G T C T G A C T A G C G T A G T A C C T G A A G T C A C G T A C T G C G T A C G T A
p-value:1e-11
log p-value:-2.534e+01
Information Content per bp:1.873
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.63%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets35.7 +/- 9.8bp
Average Position of motif in Background53.4 +/- 3.2bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0070.1_Sox30_1/Jaspar

Match Rank:1
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---TTCARTGTYYMGT
ANNTCCATTGTTCNNN
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A C T A G A G C T A C T G A C G T A G T C A G C T G T C A A C T G A C G T
C T G A C T G A C A G T C G A T A G T C G T A C G C T A A G C T C A G T T C A G C G A T A G C T T A G C G C T A C G A T G A C T

Sox17/MA0078.1/Jaspar

Match Rank:2
Score:0.58
Offset:0
Orientation:forward strand
Alignment:TTCARTGTYYMGT
CTCATTGTC----
 A C G T A C G T A G T C C G T A C T A G A G C T A C T G A C G T A G T C A G C T G T C A A C T G A C G T
G A C T G A C T G A T C C G T A A G C T A C G T A C T G A C G T A T G C A C G T A C G T A C G T A C G T

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:3
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---TTCARTGTYYMGT
ACTTTCACTTTC----
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A C T A G A G C T A C T G A C G T A G T C A G C T G T C A A C T G A C G T
C T G A A T G C G A C T C G A T A G C T A G T C C G T A A T G C A C G T A C G T G A C T A G T C A C G T A C G T A C G T A C G T

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:4
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---TTCARTGTYYMGT
AGTTTCAGTTTC----
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A C T A G A G C T A C T G A C G T A G T C A G C T G T C A A C T G A C G T
C T G A A T C G A G C T A G C T A C G T T A G C C T G A T A C G C G A T A C G T G A C T A G T C A C G T A C G T A C G T A C G T

Sox11/MA0869.1/Jaspar

Match Rank:5
Score:0.57
Offset:-6
Orientation:forward strand
Alignment:------TTCARTGTYYMGT
AACAATTTCAGTGTT----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A C T A G A G C T A C T G A C G T A G T C A G C T G T C A A C T G A C G T
C G T A C G T A A G T C C G T A C G T A A C G T A G C T C A G T A G T C C G T A A C T G A C G T A C T G A C G T A G C T A C G T A C G T A C G T A C G T

PB0005.1_Bbx_1/Jaspar

Match Rank:6
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---TTCARTGTYYMGT
TAATTCAATGAAGTG-
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A C T A G A G C T A C T G A C G T A G T C A G C T G T C A A C T G A C G T
G C A T G C T A C T G A C G A T C G A T T G A C G C T A C G T A C G A T A C T G C G T A G C T A A T C G G C A T C T A G A C G T

IRF1/MA0050.2/Jaspar

Match Rank:7
Score:0.56
Offset:-7
Orientation:forward strand
Alignment:-------TTCARTGTYYMGT-
TTTTACTTTCACTTTCACTTT
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A C T A G A G C T A C T G A C G T A G T C A G C T G T C A A C T G A C G T A C G T
G A C T A G C T A G C T A G C T C T G A A T G C C G A T A G C T A G C T A G T C C T G A A T G C G C A T G A C T G A C T A G T C C G T A A G T C G A C T G C A T G A C T

Sox6/MA0515.1/Jaspar

Match Rank:8
Score:0.56
Offset:1
Orientation:forward strand
Alignment:TTCARTGTYYMGT
-CCATTGTTTT--
 A C G T A C G T A G T C C G T A C T A G A G C T A C T G A C G T A G T C A G C T G T C A A C T G A C G T
A C G T A G T C A G T C C G T A A C G T A C G T A C T G A C G T A G C T G A C T A G C T A C G T A C G T

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:9
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:TTCARTGTYYMGT
NCCATTGTTY---
 A C G T A C G T A G T C C G T A C T A G A G C T A C T G A C G T A G T C A G C T G T C A A C T G A C G T
C T A G A G T C G A T C G C T A C G A T A C G T A T C G A C G T A G C T G A C T A C G T A C G T A C G T

SOX10/MA0442.1/Jaspar

Match Rank:10
Score:0.55
Offset:2
Orientation:forward strand
Alignment:TTCARTGTYYMGT
--CTTTGT-----
 A C G T A C G T A G T C C G T A C T A G A G C T A C T G A C G T A G T C A G C T G T C A A C T G A C G T
A C G T A C G T A G T C C G A T A C G T A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T