Information for 2-RGCCGCCATCTTK (Motif 2)

C T A G A C T G A G T C G T A C C A T G A G T C A G T C C G T A A C G T A G T C A C G T A C G T C A T G
Reverse Opposite:
G T A C G T C A G T C A T C A G C G T A C G A T A C T G C T A G G T A C C A T G T C A G T G A C G A T C
p-value:1e-58
log p-value:-1.339e+02
Information Content per bp:1.667
Number of Target Sequences with motif87.0
Percentage of Target Sequences with motif11.04%
Number of Background Sequences with motif497.5
Percentage of Background Sequences with motif1.04%
Average Position of motif in Targets53.6 +/- 20.1bp
Average Position of motif in Background51.3 +/- 31.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1/MA0095.2/Jaspar

Match Rank:1
Score:0.98
Offset:1
Orientation:reverse strand
Alignment:RGCCGCCATCTTK
-GCNGCCATCTTG
 C T A G A C T G A G T C G T A C C A T G A G T C A G T C C G T A A C G T A G T C A C G T A C G T C A T G
A C G T C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G

YY1(Zf)/Promoter/Homer

Match Rank:2
Score:0.95
Offset:1
Orientation:reverse strand
Alignment:RGCCGCCATCTTK
-GCCGCCATCTTG
 C T A G A C T G A G T C G T A C C A T G A G T C A G T C C G T A A C G T A G T C A C G T A C G T C A T G
A C G T C A T G G A T C A T G C C T A G A G T C A G T C C G T A A C G T A T G C A G C T A C G T A T C G

YY2/MA0748.1/Jaspar

Match Rank:3
Score:0.77
Offset:0
Orientation:forward strand
Alignment:RGCCGCCATCTTK
GTCCGCCATTA--
 C T A G A C T G A G T C G T A C C A T G A G T C A G T C C G T A A C G T A G T C A C G T A C G T C A T G
C T A G C G A T G A T C A T G C T A C G T G A C A G T C C G T A C G A T G A C T C G T A A C G T A C G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:4
Score:0.68
Offset:4
Orientation:forward strand
Alignment:RGCCGCCATCTTK-
----GCCATCTGTT
 C T A G A C T G A G T C G T A C C A T G A G T C A G T C C G T A A C G T A G T C A C G T A C G T C A T G A C G T
A C G T A C G T A C G T A C G T T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:5
Score:0.65
Offset:4
Orientation:forward strand
Alignment:RGCCGCCATCTTK-
----ACCATCTGTT
 C T A G A C T G A G T C G T A C C A T G A G T C A G T C C G T A A C G T A G T C A C G T A C G T C A T G A C G T
A C G T A C G T A C G T A C G T T C G A T G A C G T A C C G T A C A G T T G A C A C G T A C T G A G C T A G C T

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:6
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:RGCCGCCATCTTK----
CCNNACCATCTGGCCTN
 C T A G A C T G A G T C G T A C C A T G A G T C A G T C C G T A A C G T A G T C A C G T A C G T C A T G A C G T A C G T A C G T A C G T
A G T C T A G C T A C G C T A G T C G A G T A C A G T C C G T A A G C T T G A C A G C T C A T G A T C G G T A C G A T C A G C T C A G T

E2F2/MA0864.1/Jaspar

Match Rank:7
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----RGCCGCCATCTTK
AAAATGGCGCCATTTT-
 A C G T A C G T A C G T A C G T C T A G A C T G A G T C G T A C C A T G A G T C A G T C C G T A A C G T A G T C A C G T A C G T C A T G
C G T A C G T A C G T A C G T A C G A T A T C G A C T G A G T C A C T G A G T C T A G C G C T A G C A T C G A T C G A T C G A T A C G T

Neurog1/MA0623.1/Jaspar

Match Rank:8
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:RGCCGCCATCTTK-
----ACCATATGGT
 C T A G A C T G A G T C G T A C C A T G A G T C A G T C C G T A A C G T A G T C A C G T A C G T C A T G A C G T
A C G T A C G T A C G T A C G T T C G A T G A C G T A C C T G A A C G T T G C A G A C T A C T G A T C G G A C T

Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer

Match Rank:9
Score:0.61
Offset:4
Orientation:forward strand
Alignment:RGCCGCCATCTTK-
----RCCATMTGTT
 C T A G A C T G A G T C G T A C C A T G A G T C A G T C C G T A A C G T A G T C A C G T A C G T C A T G A C G T
A C G T A C G T A C G T A C G T C T G A T G A C T G A C C G T A A C G T T G A C A G C T C T A G A C G T G A C T

PB0164.1_Smad3_2/Jaspar

Match Rank:10
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----RGCCGCCATCTTK
TACGCCCCGCCACTCTG
 A C G T A C G T A C G T A C G T C T A G A C T G A G T C G T A C C A T G A G T C A G T C C G T A A C G T A G T C A C G T A C G T C A T G
C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G