Information for 1-GGYCACGTGR (Motif 1)

T A C G T C A G A G C T A G T C C G T A A G T C C T A G A C G T A C T G T C G A
Reverse Opposite:
A G C T A G T C C G T A A G T C A C T G A C G T A C T G T C G A A G T C A T G C
p-value:1e-148
log p-value:-3.422e+02
Information Content per bp:1.747
Number of Target Sequences with motif285.0
Percentage of Target Sequences with motif34.13%
Number of Background Sequences with motif1665.0
Percentage of Background Sequences with motif5.14%
Average Position of motif in Targets52.0 +/- 19.3bp
Average Position of motif in Background48.4 +/- 41.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.99
Offset:0
Orientation:forward strand
Alignment:GGYCACGTGR
GGTCACGTGA
 T A C G T C A G A G C T A G T C C G T A A G T C C T A G A C G T A C T G T C G A
T A C G T C A G A G C T A T G C C G T A A G T C T C A G A C G T A C T G T C G A

CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer

Match Rank:2
Score:0.97
Offset:1
Orientation:forward strand
Alignment:GGYCACGTGR
-GHCACGTG-
 T A C G T C A G A G C T A G T C C G T A A G T C C T A G A C G T A C T G T C G A
A C G T C T A G G C A T G A T C C G T A A G T C T C A G G A C T C T A G A C G T

BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer

Match Rank:3
Score:0.97
Offset:1
Orientation:forward strand
Alignment:GGYCACGTGR
-GNCACGTG-
 T A C G T C A G A G C T A G T C C G T A A G T C C T A G A C G T A C T G T C G A
A C G T C T A G C A G T T G A C C G T A G A T C T C A G G A C T C A T G A C G T

Arnt/MA0004.1/Jaspar

Match Rank:4
Score:0.96
Offset:3
Orientation:forward strand
Alignment:GGYCACGTGR
---CACGTG-
 T A C G T C A G A G C T A G T C C G T A A G T C C T A G A C G T A C T G T C G A
A C G T A C G T A C G T G T A C C T G A A G T C A C T G A C G T A C T G A C G T

bHLHE40(bHLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.96
Offset:0
Orientation:reverse strand
Alignment:GGYCACGTGR
NGKCACGTGM
 T A C G T C A G A G C T A G T C C G T A A G T C C T A G A C G T A C T G T C G A
T C G A T C A G C A T G A G T C C G T A A G T C C T A G A C G T A C T G G T A C

c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer

Match Rank:6
Score:0.96
Offset:1
Orientation:forward strand
Alignment:GGYCACGTGR
-NCCACGTG-
 T A C G T C A G A G C T A G T C C G T A A G T C C T A G A C G T A C T G T C G A
A C G T T C G A T A G C T G A C C T G A A G T C A C T G G A C T C A T G A C G T

TFE3/MA0831.1/Jaspar

Match Rank:7
Score:0.96
Offset:1
Orientation:reverse strand
Alignment:GGYCACGTGR-
-GTCACGTGNT
 T A C G T C A G A G C T A G T C C G T A A G T C C T A G A C G T A C T G T C G A A C G T
A C G T C T A G A C G T T G A C C G T A A G T C T C A G C G A T A T C G T C G A A G C T

Arntl/MA0603.1/Jaspar

Match Rank:8
Score:0.95
Offset:0
Orientation:forward strand
Alignment:GGYCACGTGR
GGTCACGTGC
 T A C G T C A G A G C T A G T C C G T A A G T C C T A G A C G T A C T G T C G A
C A T G T C A G C A G T G T A C G C T A A G T C C T A G G A C T C A T G G A T C

BHLHE40/MA0464.2/Jaspar

Match Rank:9
Score:0.95
Offset:1
Orientation:reverse strand
Alignment:GGYCACGTGR-
-GTCACGTGAN
 T A C G T C A G A G C T A G T C C G T A A G T C C T A G A C G T A C T G T C G A A C G T
A C G T C T A G C A G T T G A C C T G A A G T C C T A G A C G T C A T G G T C A A C G T

NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer

Match Rank:10
Score:0.95
Offset:3
Orientation:reverse strand
Alignment:GGYCACGTGR-
---CACGTGBN
 T A C G T C A G A G C T A G T C C G T A A G T C C T A G A C G T A C T G T C G A A C G T
A C G T A C G T A C G T G T A C C T G A A G T C C T A G G C A T C A T G A C G T G C T A