Information for 7-CAGGCKTAGCAGAMAC (Motif 7)

G T A C C G T A C T A G A C T G T G A C A C G T A G C T C G T A A C T G A G T C C G T A A T C G G T C A T G C A C G T A A G T C
Reverse Opposite:
A C T G C G A T A C G T A C G T A T G C C G A T A C T G G T A C C G A T C T G A G T C A A C T G T A G C A G T C C G A T A C T G
p-value:1e-13
log p-value:-3.043e+01
Information Content per bp:1.733
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.11%
Number of Background Sequences with motif3.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets34.5 +/- 12.9bp
Average Position of motif in Background69.2 +/- 11.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0130.1_Gm397_2/Jaspar

Match Rank:1
Score:0.58
Offset:4
Orientation:forward strand
Alignment:CAGGCKTAGCAGAMAC----
----AGCGGCACACACGCAA
 G T A C C G T A C T A G A C T G T G A C A C G T A G C T C G T A A C T G A G T C C G T A A T C G G T C A T G C A C G T A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A

MAFK/MA0496.1/Jaspar

Match Rank:2
Score:0.54
Offset:0
Orientation:forward strand
Alignment:CAGGCKTAGCAGAMAC
CTGAGTCAGCAATTT-
 G T A C C G T A C T A G A C T G T G A C A C G T A G C T C G T A A C T G A G T C C G T A A T C G G T C A T G C A C G T A A G T C
G T A C G C A T C T A G C G T A T A C G A G C T G T A C C G T A A C T G A T G C G C T A C G T A G C A T G C A T G C A T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.53
Offset:8
Orientation:reverse strand
Alignment:CAGGCKTAGCAGAMAC--
--------CCAGACRSVB
 G T A C C G T A C T A G A C T G T G A C A C G T A G C T C G T A A C T G A G T C C G T A A T C G G T C A T G C A C G T A A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

NRL/MA0842.1/Jaspar

Match Rank:4
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:CAGGCKTAGCAGAMAC
----GTCAGCANNTN-
 G T A C C G T A C T A G A C T G T G A C A C G T A G C T C G T A A C T G A G T C C G T A A T C G G T C A T G C A C G T A A G T C
A C G T A C G T A C G T A C G T T C A G C G A T G T A C C G T A C A T G A G T C C T G A C G T A C G T A G C A T G C A T A C G T

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:5
Score:0.52
Offset:2
Orientation:forward strand
Alignment:CAGGCKTAGCAGAMAC-
--ADGGYAGYAGCATCT
 G T A C C G T A C T A G A C T G T G A C A C G T A G C T C G T A A C T G A G T C C G T A A T C G G T C A T G C A C G T A A G T C A C G T
A C G T A C G T C T G A C G A T C T A G T C A G G A T C C T G A T C A G G A T C C T G A A C T G A G T C G C T A A C G T A G T C G C A T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:6
Score:0.52
Offset:8
Orientation:reverse strand
Alignment:CAGGCKTAGCAGAMAC
--------BCAGACWA
 G T A C C G T A C T A G A C T G T G A C A C G T A G C T C G T A A C T G A G T C C G T A A T C G G T C A T G C A C G T A A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A

MAFF/MA0495.1/Jaspar

Match Rank:7
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-CAGGCKTAGCAGAMAC-
GCTGAGTCAGCAATTTTT
 A C G T G T A C C G T A C T A G A C T G T G A C A C G T A G C T C G T A A C T G A G T C C G T A A T C G G T C A T G C A C G T A A G T C A C G T
A T C G G T A C G C A T C T A G C G T A T A C G G C A T G T A C C G T A C A T G A G T C C G T A C G T A G C A T G C A T G C A T G A C T G C A T

Spz1/MA0111.1/Jaspar

Match Rank:8
Score:0.52
Offset:2
Orientation:forward strand
Alignment:CAGGCKTAGCAGAMAC
--AGGGTAACAGC---
 G T A C C G T A C T A G A C T G T G A C A C G T A G C T C G T A A C T G A G T C C G T A A T C G G T C A T G C A C G T A A G T C
A C G T A C G T C T G A A T C G C T A G A C T G C A G T C G T A C G T A T A G C C T G A A C T G T A G C A C G T A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.50
Offset:8
Orientation:reverse strand
Alignment:CAGGCKTAGCAGAMAC
--------CCAGACAG
 G T A C C G T A C T A G A C T G T G A C A C G T A G C T C G T A A C T G A G T C C G T A A T C G G T C A T G C A C G T A A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G

PB0208.1_Zscan4_2/Jaspar

Match Rank:10
Score:0.50
Offset:4
Orientation:forward strand
Alignment:CAGGCKTAGCAGAMAC----
----CGAAGCACACAAAATA
 G T A C C G T A C T A G A C T G T G A C A C G T A G C T C G T A A C T G A G T C C G T A A T C G G T C A T G C A C G T A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A