Information for 22-TGGTCCTTTTCAC (Motif 43)

A C G T A C T G A C T G A C G T A G T C A G T C A C G T A C G T A C G T A C G T A G T C C G T A A G T C
Reverse Opposite:
A C T G A C G T A C T G C G T A C G T A C G T A C G T A A C T G A C T G C G T A A G T C A G T C C G T A
p-value:1e-6
log p-value:-1.446e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.48%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets63.3 +/- 23.8bp
Average Position of motif in Background55.1 +/- 14.3bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rarg/MA0859.1/Jaspar

Match Rank:1
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TGGTCCTTTTCAC---
TTGACCTTTTGACCTT
 A C G T A C T G A C T G A C G T A G T C A G T C A C G T A C G T A C G T A C G T A G T C C G T A A G T C A C G T A C G T A C G T
C G A T A G C T T C A G T G C A T G A C G T A C A G C T G A C T G C A T A G C T T C A G T G C A T G A C A G T C A G C T A G C T

RARA/MA0729.1/Jaspar

Match Rank:2
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--TGGTCCTTTTCAC---
CATTGACCTTTTGACCTC
 A C G T A C G T A C G T A C T G A C T G A C G T A G T C A G T C A C G T A C G T A C G T A C G T A G T C C G T A A G T C A C G T A C G T A C G T
T G A C G T C A C G A T A G C T C T A G C G T A G T A C G T A C A C G T G C A T G C A T A G C T A T C G T C G A G T A C A G T C A G C T G A T C

Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer

Match Rank:3
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---TGGTCCTTTTCAC
GYCTGGYYTNTGTCA-
 A C G T A C G T A C G T A C G T A C T G A C T G A C G T A G T C A G T C A C G T A C G T A C G T A C G T A G T C C G T A A G T C
A T C G A G C T A G T C A C G T A C T G A T C G A G C T G A C T G C A T A G C T G A C T T A C G A G C T G A T C G C T A A C G T

PB0137.1_Irf3_2/Jaspar

Match Rank:4
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TGGTCCTTTTCAC
NNGCACCTTTCTCC
 A C G T A C G T A C T G A C T G A C G T A G T C A G T C A C G T A C G T A C G T A C G T A G T C C G T A A G T C
A G C T G A T C T C A G T A G C G C T A A T G C T A G C G C A T C G A T G C A T G A T C G C A T G T A C G A T C

Rarb/MA0857.1/Jaspar

Match Rank:5
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:TGGTCCTTTTCAC----
-TGACCTTTTGACCTTT
 A C G T A C T G A C T G A C G T A G T C A G T C A C G T A C G T A C G T A C G T A G T C C G T A A G T C A C G T A C G T A C G T A C G T
A C G T G A C T T C A G T C G A T G A C A G T C A G C T G A C T C G A T A G C T T A C G G T C A T G A C G T A C A G C T G A C T C G A T

Nr2f6(var.2)/MA0728.1/Jaspar

Match Rank:6
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:TGGTCCTTTTCAC---
-TGACCTTTTGACCTC
 A C G T A C T G A C T G A C G T A G T C A G T C A C G T A C G T A C G T A C G T A G T C C G T A A G T C A C G T A C G T A C G T
A C G T A G C T C T A G C G T A G T A C A G T C A C G T G A C T G C A T C A G T T C A G G T C A A G T C A G T C G A C T A G T C

GATA2/MA0036.2/Jaspar

Match Rank:7
Score:0.56
Offset:0
Orientation:forward strand
Alignment:TGGTCCTTTTCAC-
AGATTCTTATCTGT
 A C G T A C T G A C T G A C G T A G T C A G T C A C G T A C G T A C G T A C G T A G T C C G T A A G T C A C G T
C G T A C T A G C T G A G C A T A G C T A T G C A G C T C G A T C G T A A C G T A G T C C G A T A T C G G C A T

RBPJ:Ebox(?,bHLH)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:8
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----TGGTCCTTTTCAC
CAKCTGKYCYYTTYCCC
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C G T A G T C A G T C A C G T A C G T A C G T A C G T A G T C C G T A A G T C
T G A C G C T A A C G T T G A C C G A T A C T G A C T G A G T C A G T C A G T C A G C T A G C T A G C T A G C T G A T C T G A C G T A C

Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer

Match Rank:9
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:TGGTCCTTTTCAC
---NCCTTATCTG
 A C G T A C T G A C T G A C G T A G T C A G T C A C G T A C G T A C G T A C G T A G T C C G T A A G T C
A C G T A C G T A C G T A G C T A G T C A T G C A C G T A C G T C G T A A C G T A G T C C G A T A T C G

Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer

Match Rank:10
Score:0.54
Offset:3
Orientation:forward strand
Alignment:TGGTCCTTTTCAC
---NNCTTATCTN
 A C G T A C T G A C T G A C G T A G T C A G T C A C G T A C G T A C G T A C G T A G T C C G T A A G T C
A C G T A C G T A C G T A G C T A G T C A T G C A G C T A C G T C G T A A C G T A G T C C G A T A T G C