Information for 13-GTCACATGTG (Motif 26)

C A T G A C G T T A G C T G C A A T G C T G C A A C G T T A C G A G C T T A C G
Reverse Opposite:
A T G C T C G A A T G C T G C A A C G T T A C G A C G T A T C G T G C A G T A C
p-value:1e-7
log p-value:-1.663e+01
Information Content per bp:1.654
Number of Target Sequences with motif71.0
Percentage of Target Sequences with motif8.59%
Number of Background Sequences with motif1996.1
Percentage of Background Sequences with motif4.32%
Average Position of motif in Targets49.8 +/- 26.3bp
Average Position of motif in Background50.1 +/- 37.9bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

USF2/MA0526.1/Jaspar

Match Rank:1
Score:0.79
Offset:-1
Orientation:reverse strand
Alignment:-GTCACATGTG
GGTCACATGAC
 A C G T C A T G A C G T T A G C T G C A A T G C T G C A A C G T T A C G A G C T T A C G
C T A G T C A G A G C T A G T C C G T A A G T C T C G A A C G T A C T G T C G A A G T C

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:2
Score:0.77
Offset:0
Orientation:reverse strand
Alignment:GTCACATGTG
GTCACATGAY
 C A T G A C G T T A G C T G C A A T G C T G C A A C G T T A C G A G C T T A C G
T C A G G A C T G T A C G T C A A G T C T C G A G C A T A T C G T C G A A G T C

USF1/MA0093.2/Jaspar

Match Rank:3
Score:0.76
Offset:-1
Orientation:reverse strand
Alignment:-GTCACATGTG
GGTCACGTGGC
 A C G T C A T G A C G T T A G C T G C A A T G C T G C A A C G T T A C G A G C T T A C G
C T A G C T A G G A C T A G T C C G T A A G T C T C A G C G A T A C T G T C A G A G T C

Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer

Match Rank:4
Score:0.74
Offset:0
Orientation:forward strand
Alignment:GTCACATGTG
GTCACGTGGT
 C A T G A C G T T A G C T G C A A T G C T G C A A C G T T A C G A G C T T A C G
T C A G A C G T A G T C T C G A A G T C T C A G G C A T C T A G C T A G A G C T

Arntl/MA0603.1/Jaspar

Match Rank:5
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-GTCACATGTG
GGTCACGTGC-
 A C G T C A T G A C G T T A G C T G C A A T G C T G C A A C G T T A C G A G C T T A C G
C A T G T C A G C A G T G T A C G C T A A G T C C T A G G A C T C A T G G A T C A C G T

NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer

Match Rank:6
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:GTCACATGTG
GTCACGTGGM
 C A T G A C G T T A G C T G C A A T G C T G C A A C G T T A C G A G C T T A C G
T C A G C A G T A G T C C G T A A T G C T C A G G C A T A C T G A C T G T G A C

Myc/MA0147.2/Jaspar

Match Rank:7
Score:0.70
Offset:3
Orientation:forward strand
Alignment:GTCACATGTG---
---CCATGTGCTT
 C A T G A C G T T A G C T G C A A T G C T G C A A C G T T A C G A G C T T A C G A C G T A C G T A C G T
A C G T A C G T A C G T T G A C A G T C C G T A A G C T A C T G A C G T A C T G A T G C G A C T A G C T

Twist2/MA0633.1/Jaspar

Match Rank:8
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:GTCACATGTG--
--NACATATGGN
 C A T G A C G T T A G C T G C A A T G C T G C A A C G T T A C G A G C T T A C G A C G T A C G T
A C G T A C G T G T C A G T C A A G T C C G T A A G C T C T G A A C G T A C T G A C T G A G C T

Mitf/MA0620.1/Jaspar

Match Rank:9
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-GTCACATGTG
GGTCACGTGG-
 A C G T C A T G A C G T T A G C T G C A A T G C T G C A A C G T T A C G A G C T T A C G
C T A G T C A G A C G T T G A C G T C A A G T C T C A G G C A T A C T G T C A G A C G T

TFE3/MA0831.1/Jaspar

Match Rank:10
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:GTCACATGTG
GTCACGTGNT
 C A T G A C G T T A G C T G C A A T G C T G C A A C G T T A C G A G C T T A C G
C T A G A C G T T G A C C G T A A G T C T C A G C G A T A T C G T C G A A G C T