p-value: | 1e-8 |
log p-value: | -1.929e+01 |
Information Content per bp: | 1.815 |
Number of Target Sequences with motif | 4.0 |
Percentage of Target Sequences with motif | 0.48% |
Number of Background Sequences with motif | 0.0 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 76.5 +/- 21.7bp |
Average Position of motif in Background | 0.0 +/- 0.0bp |
Strand Bias (log2 ratio + to - strand density) | -1.6 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
SD0001.1_at_AC_acceptor/Jaspar
Match Rank: | 1 |
Score: | 0.62 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --GGTWAGTKMMYGCWCA CAGGTAAGTAT------- |
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ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer
Match Rank: | 2 |
Score: | 0.58 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | GGTWAGTKMMYGCWCA RGTTAGTGCCCY---- |
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RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer
Match Rank: | 3 |
Score: | 0.57 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -GGTWAGTKMMYGCWCA- RGGTCADNNAGAGGTCAV |
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RARA(var.2)/MA0730.1/Jaspar
Match Rank: | 4 |
Score: | 0.53 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -GGTWAGTKMMYGCWCA AGGTCATGCAAAGGTCA |
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RARA::RXRA/MA0159.1/Jaspar
Match Rank: | 5 |
Score: | 0.52 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -GGTWAGTKMMYGCWCA AGGTCACGGAGAGGTCA |
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Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer
Match Rank: | 6 |
Score: | 0.51 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | GGTWAGTKMMYGCWCA -TTAAGTGCTT----- |
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Rarb(var.2)/MA0858.1/Jaspar
Match Rank: | 7 |
Score: | 0.51 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -GGTWAGTKMMYGCWCA AGGTCAACTAAAGGTCA |
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FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer
Match Rank: | 8 |
Score: | 0.51 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -GGTWAGTKMMYGCWCA AGGTCANTGACCTN--- |
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ISL2/MA0914.1/Jaspar
Match Rank: | 9 |
Score: | 0.49 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | GGTWAGTKMMYGCWCA -TTAAGTGC------- |
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NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer
Match Rank: | 10 |
Score: | 0.49 |
Offset: | 5 |
Orientation: | reverse strand |
Alignment: | GGTWAGTKMMYGCWCA- -----GCGCATGCGCAG |
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