Motif 17

Information for 14-CSCACKCACAGCT (Motif 17)

Reverse Opposite:

p-value:	1e-9
log p-value:	-2.247e+01
Information Content per bp:	1.872
Number of Target Sequences with motif	6.0
Percentage of Target Sequences with motif	0.73%
Number of Background Sequences with motif	4.3
Percentage of Background Sequences with motif	0.01%
Average Position of motif in Targets	61.0 +/- 19.9bp
Average Position of motif in Background	37.8 +/- 36.7bp
Strand Bias (log2 ratio + to - strand density)	0.4
Multiplicity (# of sites on avg that occur together)	1.17
Motif File:	file (matrix) reverse opposite
SVG Files for Logos:	forward logo reverse opposite

Matches to Known Motifs

TBX15/MA0803.1/Jaspar

Match Rank:	1
Score:	0.66
Offset:	5
Orientation:	reverse strand
Alignment:	CSCACKCACAGCT -----TCACACCT

TBX1/MA0805.1/Jaspar

Match Rank:	2
Score:	0.65
Offset:	5
Orientation:	reverse strand
Alignment:	CSCACKCACAGCT -----TCACACCT

MGA/MA0801.1/Jaspar

Match Rank:	3
Score:	0.64
Offset:	5
Orientation:	reverse strand
Alignment:	CSCACKCACAGCT -----TCACACCT

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:	4
Score:	0.63
Offset:	-2
Orientation:	reverse strand
Alignment:	--CSCACKCACAGCT CRCCCACGCA-----

TBX4/MA0806.1/Jaspar

Match Rank:	5
Score:	0.62
Offset:	5
Orientation:	reverse strand
Alignment:	CSCACKCACAGCT -----TCACACCT

TBX21/MA0690.1/Jaspar

Match Rank:	6
Score:	0.61
Offset:	4
Orientation:	reverse strand
Alignment:	CSCACKCACAGCT- ----TTCACACCTT

TBX5/MA0807.1/Jaspar

Match Rank:	7
Score:	0.61
Offset:	5
Orientation:	reverse strand
Alignment:	CSCACKCACAGCT -----TCACACCT

POL009.1_DCE_S_II/Jaspar

Match Rank:	8
Score:	0.61
Offset:	6
Orientation:	reverse strand
Alignment:	CSCACKCACAGCT ------CACAGN-

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:	9
Score:	0.61
Offset:	-1
Orientation:	forward strand
Alignment:	-CSCACKCACAGCT TBGCACGCAA----

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:	10
Score:	0.61
Offset:	-1
Orientation:	reverse strand
Alignment:	-CSCACKCACAGCT GCGCATGCGCAG--