Information for 8-TTGTACTGCTAAC (Motif 9)

A C G T A C G T A C T G A C G T C G T A A G T C C G A T A C T G A G T C C G A T C G T A C G T A G T A C
Reverse Opposite:
A C T G A C G T C G A T C G T A T A C G A G T C C G T A C T A G G A C T C G T A A G T C C G T A G T C A
p-value:1e-13
log p-value:-3.071e+01
Information Content per bp:1.821
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.71%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets55.5 +/- 36.2bp
Average Position of motif in Background22.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pou5f1::Sox2/MA0142.1/Jaspar

Match Rank:1
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--TTGTACTGCTAAC
CTTTGTTATGCAAAT
 A C G T A C G T A C G T A C G T A C T G A C G T C G T A A G T C C G A T A C T G A G T C C G A T C G T A C G T A G T A C
A G T C G C A T A G C T C A G T T A C G C G A T G A C T G C T A C G A T A C T G A G T C C G T A C T G A C T G A C A G T

OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--TTGTACTGCTAAC
CATTGTTATGCAAAT
 A C G T A C G T A C G T A C G T A C T G A C G T C G T A A G T C C G A T A C T G A G T C C G A T C G T A C G T A G T A C
G A T C G C T A G A C T C G A T A T C G C G A T G A C T C G T A C G A T C A T G A G T C C G T A C T G A C G T A C G A T

PB0121.1_Foxj3_2/Jaspar

Match Rank:3
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----TTGTACTGCTAAC
NNCTTTGTTTTGNTNNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T C G T A A G T C C G A T A C T G A G T C C G A T C G T A C G T A G T A C
G C A T A T G C G T A C C G A T G C A T C G A T C T A G C G A T C A G T C G A T A C G T C T A G C A T G G A C T T A C G G C A T A C G T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:4
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---TTGTACTGCTAAC
CCATTGTTNY------
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T C G T A A G T C C G A T A C T G A G T C C G A T C G T A C G T A G T A C
A T G C G T A C C G T A A G C T G C A T T A C G A G C T A G C T A G T C A G C T A C G T A C G T A C G T A C G T A C G T A C G T

PB0183.1_Sry_2/Jaspar

Match Rank:5
Score:0.57
Offset:-6
Orientation:reverse strand
Alignment:------TTGTACTGCTAAC
CNNNTATTGTTCNNNNN--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T C G T A A G T C C G A T A C T G A G T C C G A T C G T A C G T A G T A C
A T G C C T G A A G T C A G T C G A C T C G T A A C G T A G C T T C A G G C A T A C G T A G T C G T A C C A T G G C A T C T A G C T G A A C G T A C G T

PB0109.1_Bbx_2/Jaspar

Match Rank:6
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:TTGTACTGCTAAC-----
-NNNNCTGTTAACNNTNN
 A C G T A C G T A C T G A C G T C G T A A G T C C G A T A C T G A G T C C G A T C G T A C G T A G T A C A C G T A C G T A C G T A C G T A C G T
A C G T A G T C G A T C T G C A C G T A T A G C A G C T C A T G C A G T A G C T C T G A G T C A G A T C T C G A C T G A C G A T A G T C C T G A

PB0173.1_Sox21_2/Jaspar

Match Rank:7
Score:0.56
Offset:-6
Orientation:forward strand
Alignment:------TTGTACTGCTAAC
AATCAATTGTTCCGCTA--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T C G T A A G T C C G A T A C T G A G T C C G A T C G T A C G T A G T A C
T G A C T C A G A G C T A T G C G C T A C G T A A G C T C G A T A T C G C G A T A G C T A T G C T G A C A C T G G A T C C A G T T C G A A C G T A C G T

MYBL1/MA0776.1/Jaspar

Match Rank:8
Score:0.56
Offset:4
Orientation:forward strand
Alignment:TTGTACTGCTAAC---
----ACCGTTAACGGT
 A C G T A C G T A C T G A C G T C G T A A G T C C G A T A C T G A G T C C G A T C G T A C G T A G T A C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T G A T G A C T A G C T C A G G A C T G C A T C G T A T C G A G T A C A T C G C A T G G A C T

NRL/MA0842.1/Jaspar

Match Rank:9
Score:0.55
Offset:2
Orientation:forward strand
Alignment:TTGTACTGCTAAC
--AATTTGCTGAC
 A C G T A C G T A C T G A C G T C G T A A G T C C G A T A C T G A G T C C G A T C G T A C G T A G T A C
A C G T A C G T C G T A C G T A G C A T G C A T G A C T T C A G G T A C G C A T C A T G G C T A A G T C

PB0123.1_Foxl1_2/Jaspar

Match Rank:10
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----TTGTACTGCTAAC
NNTTTTGTTTTGATNT-
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T C G T A A G T C C G A T A C T G A G T C C G A T C G T A C G T A G T A C
C A G T C A T G G A C T C A G T G C A T G C A T T C A G A C G T C A G T C G A T C A G T C T A G G C T A G C A T G C T A C G A T A C G T