Information for 9-ACAATGACAG (Motif 13)

C T G A A G T C G T C A C T G A A C G T C T A G G T C A A T G C C T G A A C T G
Reverse Opposite:
T G A C A G C T A T C G A C G T G A T C C G T A A G C T A C G T C T A G G A C T
p-value:1e-10
log p-value:-2.329e+01
Information Content per bp:1.833
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif2.12%
Number of Background Sequences with motif131.3
Percentage of Background Sequences with motif0.28%
Average Position of motif in Targets60.5 +/- 25.7bp
Average Position of motif in Background50.0 +/- 27.3bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0169.1_Tgif1/Jaspar

Match Rank:1
Score:0.78
Offset:-1
Orientation:forward strand
Alignment:-ACAATGACAG------
GATATTGACAGCTGCGT
 A C G T C T G A A G T C G T C A C T G A A C G T C T A G G T C A A T G C C T G A A C T G A C G T A C G T A C G T A C G T A C G T A C G T
C A G T C T G A A C G T C G T A C G A T C G A T A C T G C G T A A G T C C T G A C T A G A T G C A C G T T A C G T A G C A C T G C G A T

Sox17/MA0078.1/Jaspar

Match Rank:2
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-ACAATGACAG
GACAATGNN--
 A C G T C T G A A G T C G T C A C T G A A C G T C T A G G T C A A T G C C T G A A C T G
T A C G G T C A A G T C C G T A C T G A C G A T C T A G C G T A C T A G A C G T A C G T

MEIS3/MA0775.1/Jaspar

Match Rank:3
Score:0.73
Offset:3
Orientation:forward strand
Alignment:ACAATGACAG-
---TTGACAGG
 C T G A A G T C G T C A C T G A A C G T C T A G G T C A A T G C C T G A A C T G A C G T
A C G T A C G T A C G T C G A T G C A T A T C G C T G A G A T C C T G A A C T G A T C G

MEIS1/MA0498.2/Jaspar

Match Rank:4
Score:0.73
Offset:3
Orientation:forward strand
Alignment:ACAATGACAG
---TTGACAG
 C T G A A G T C G T C A C T G A A C G T C T A G G T C A A T G C C T G A A C T G
A C G T A C G T A C G T G C A T G C A T A T C G T G C A A G T C C T G A C T A G

PH0141.1_Pknox2/Jaspar

Match Rank:5
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:ACAATGACAG------
NNATTGACAGGTGCTT
 C T G A A G T C G T C A C T G A A C G T C T A G G T C A A T G C C T G A A C T G A C G T A C G T A C G T A C G T A C G T A C G T
T C G A C A G T C G T A C A G T A G C T C T A G C G T A A G T C C T G A C A T G A T C G A G C T T A C G A G T C G A C T C G A T

MEIS2/MA0774.1/Jaspar

Match Rank:6
Score:0.72
Offset:3
Orientation:forward strand
Alignment:ACAATGACAG-
---TTGACAGC
 C T G A A G T C G T C A C T G A A C G T C T A G G T C A A T G C C T G A A C T G A C G T
A C G T A C G T A C G T C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C

PB0172.1_Sox1_2/Jaspar

Match Rank:7
Score:0.71
Offset:-5
Orientation:reverse strand
Alignment:-----ACAATGACAG
NNNTAACAATTATAN
 A C G T A C G T A C G T A C G T A C G T C T G A A G T C G T C A C T G A A C G T C T A G G T C A A T G C C T G A A C T G
A T G C T C A G G T A C A C G T T G C A T G C A A T G C C T G A C T G A G A C T C G A T C T G A G A C T C T G A C A T G

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:8
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---ACAATGACAG
VRRACAAWGG---
 A C G T A C G T A C G T C T G A A G T C G T C A C T G A A C G T C T A G G T C A A T G C C T G A A C T G
T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G A C G T A C G T A C G T

SOX10/MA0442.1/Jaspar

Match Rank:9
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:ACAATGACAG
ACAAAG----
 C T G A A G T C G T C A C T G A A C G T C T A G G T C A A T G C C T G A A C T G
G T C A A T G C C G T A T G C A C G T A C T A G A C G T A C G T A C G T A C G T

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:10
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--ACAATGACAG
RAACAATGGN--
 A C G T A C G T C T G A A G T C G T C A C T G A A C G T C T A G G T C A A T G C C T G A A C T G
C T G A T C G A C G T A A T G C C G T A C G T A C G A T C T A G T C A G G A T C A C G T A C G T