Information for 8-GTGGTBAGAGTTC (Motif 9)

A T C G A C G T A C T G A C T G A C G T A C G T C T G A A C T G C G T A A C T G A C G T A C G T A G T C
Reverse Opposite:
C T A G C G T A G T C A A G T C C G A T A G T C A G C T T C G A C G T A A G T C A G T C C G T A A T G C
p-value:1e-11
log p-value:-2.732e+01
Information Content per bp:1.866
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.86%
Number of Background Sequences with motif4.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets45.7 +/- 27.9bp
Average Position of motif in Background76.8 +/- 14.4bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NR2C2/MA0504.1/Jaspar

Match Rank:1
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-GTGGTBAGAGTTC-
AGGGGTCAGAGGTCA
 A C G T A T C G A C G T A C T G A C T G A C G T A C G T C T G A A C T G C G T A A C T G A C G T A C G T A G T C A C G T
T G C A T C A G T C A G A C T G C A T G C A G T A T G C C T G A C T A G C T G A C T A G C A T G A C G T A G T C C T G A

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:2
Score:0.68
Offset:0
Orientation:forward strand
Alignment:GTGGTBAGAGTTC-
GAGGTCAAAGGTCA
 A T C G A C G T A C T G A C T G A C G T A C G T C T G A A C T G C G T A A C T G A C G T A C G T A G T C A C G T
T C A G C T G A C T A G C A T G A C G T A T G C C T G A C T G A C T G A C T A G C A T G A C G T A T G C C T G A

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:3
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--GTGGTBAGAGTTC
CTGTGGTTTN-----
 A C G T A C G T A T C G A C G T A C T G A C T G A C G T A C G T C T G A A C T G C G T A A C T G A C G T A C G T A G T C
G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G A C G T A C G T A C G T A C G T A C G T

RXRG/MA0856.1/Jaspar

Match Rank:4
Score:0.64
Offset:0
Orientation:forward strand
Alignment:GTGGTBAGAGTTC-
GGGGTCAAAGGTCA
 A T C G A C G T A C T G A C T G A C G T A C G T C T G A A C T G C G T A A C T G A C G T A C G T A G T C A C G T
T C A G T C A G C A T G C A T G A C G T A G T C C T G A C T G A C T G A C A T G C A T G A C G T A G T C T C G A

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:5
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----GTGGTBAGAGTTC
NNHTGTGGTTWN-----
 A C G T A C G T A C G T A C G T A T C G A C G T A C T G A C T G A C G T A C G T C T G A A C T G C G T A A C T G A C G T A C G T A G T C
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G A C G T A C G T A C G T A C G T A C G T

Rxra/MA0512.2/Jaspar

Match Rank:6
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GTGGTBAGAGTTC-
GGGGTCAAAGGTCA
 A T C G A C G T A C T G A C T G A C G T A C G T C T G A A C T G C G T A A C T G A C G T A C G T A G T C A C G T
T C A G T C A G C A T G C A T G A C G T A G T C T C G A C T G A T C G A A T C G A C T G A C G T A G T C T C G A

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:7
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---GTGGTBAGAGTTC
GCTGTGGTTT------
 A C G T A C G T A C G T A T C G A C G T A C T G A C T G A C G T A C G T C T G A A C T G C G T A A C T G A C G T A C G T A G T C
A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T A C G T A C G T A C G T A C G T A C G T A C G T

RXRB/MA0855.1/Jaspar

Match Rank:8
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GTGGTBAGAGTTC-
GGGGTCAAAGGTCA
 A T C G A C G T A C T G A C T G A C G T A C G T C T G A A C T G C G T A A C T G A C G T A C G T A G T C A C G T
T C A G T C A G C T A G C A T G A C G T A G T C C T G A C T G A T C G A C A T G C A T G A C G T A G T C T C G A

Nr2f6/MA0677.1/Jaspar

Match Rank:9
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GTGGTBAGAGTTC-
GAGGTCAAAGGTCA
 A T C G A C G T A C T G A C T G A C G T A C G T C T G A A C T G C G T A A C T G A C G T A C G T A G T C A C G T
T C A G T C G A C A T G C A T G A C G T A G T C C G T A C T G A T C G A A C T G C A T G A C G T A G T C C T G A

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:10
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---GTGGTBAGAGTTC
NNTGTGGTTT------
 A C G T A C G T A C G T A T C G A C G T A C T G A C T G A C G T A C G T C T G A A C T G C G T A A C T G A C G T A C G T A G T C
A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T A C G T A C G T A C G T A C G T A C G T A C G T