Information for 12-GCTCTCCACA (Motif 24)

A C T G A G T C A C G T A G T C A C G T A G T C A G T C C G T A A G T C C G T A
Reverse Opposite:
A C G T A C T G A C G T A C T G A C T G C G T A A C T G C G T A A C T G A G T C
p-value:1e-6
log p-value:-1.507e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.49%
Number of Background Sequences with motif3.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets41.5 +/- 26.0bp
Average Position of motif in Background58.1 +/- 26.4bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF354C/MA0130.1/Jaspar

Match Rank:1
Score:0.71
Offset:3
Orientation:forward strand
Alignment:GCTCTCCACA
---ATCCAC-
 A C T G A G T C A C G T A G T C A C G T A G T C A G T C C G T A A G T C C G T A
A C G T A C G T A C G T T G C A G C A T A G T C A G T C C G T A A T G C A C G T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:2
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-GCTCTCCACA
NSCACTYVAV-
 A C G T A C T G A G T C A C G T A G T C A C G T A G T C A G T C C G T A A G T C C G T A
C T A G T A G C A G T C G C T A G A T C A C G T G A T C T C G A C T G A T A C G A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:3
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GCTCTCCACA---
-NWAACCACADNN
 A C T G A G T C A C G T A G T C A C G T A G T C A G T C C G T A A G T C C G T A A C G T A C G T A C G T
A C G T T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:4
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GCTCTCCACA
AASCACTCAA--
 A C G T A C G T A C T G A G T C A C G T A G T C A C G T A G T C A G T C C G T A A G T C C G T A
C T G A C T G A T A G C G A T C G C T A G T A C A C G T G A T C T G C A C G T A A C G T A C G T

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:5
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GCTCTCCACA--
SCTGTCARCACC
 A C T G A G T C A C G T A G T C A C G T A G T C A G T C C G T A A G T C C G T A A C G T A C G T
T A G C G A T C C G A T C A T G G C A T A G T C G T C A C T G A A G T C C T G A T A G C A G T C

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:6
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GCTCTCCACA
RSCACTYRAG-
 A C G T A C T G A G T C A C G T A G T C A C G T A G T C A G T C C G T A A G T C C G T A
C T A G T A C G A G T C C G T A A G T C A C G T A G T C T C G A C G T A T A C G A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:7
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GCTCTCCACA
AGCCACTCAAG-
 A C G T A C G T A C T G A G T C A C G T A G T C A C G T A G T C A G T C C G T A A G T C C G T A
C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G A C G T

FOXH1/MA0479.1/Jaspar

Match Rank:8
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GCTCTCCACA
TCCAATCCACA
 A C G T A C T G A G T C A C G T A G T C A C G T A G T C A G T C C G T A A G T C C G T A
A G C T A G T C T A G C C G T A C G T A A C G T G T A C G T A C C G T A A G T C C G T A

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:9
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:GCTCTCCACA--
--AAACCACAGC
 A C T G A G T C A C G T A G T C A C G T A G T C A G T C C G T A A G T C C G T A A C G T A C G T
A C G T A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GCTCTCCACA--
SSAATCCACANN
 A C T G A G T C A C G T A G T C A C G T A G T C A G T C C G T A A G T C C G T A A C G T A C G T
A T G C T A G C C T G A C G T A A C G T G T A C G T A C C T G A A G T C C G T A C T G A G T A C