Information for 13-AAACTTGGCCAGA (Motif 18)

C G T A C G T A C G T A G T A C A C G T A C G T A C T G A C T G A G T C G T A C C G T A A C T G C G T A
Reverse Opposite:
A C G T G T A C A C G T A C T G A C T G A G T C A G T C C G T A C G T A A C T G A C G T A C G T C G A T
p-value:1e-9
log p-value:-2.166e+01
Information Content per bp:1.913
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.61%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets42.2 +/- 28.4bp
Average Position of motif in Background53.8 +/- 24.7bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIC/MA0161.1/Jaspar

Match Rank:1
Score:0.63
Offset:4
Orientation:forward strand
Alignment:AAACTTGGCCAGA
----TTGGCA---
 C G T A C G T A C G T A G T A C A C G T A C G T A C T G A C T G A G T C G T A C C G T A A C T G C G T A
A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:2
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:AAACTTGGCCAGA
---NTTGGCANN-
 C G T A C G T A C G T A G T A C A C G T A C G T A C T G A C T G A G T C G T A C C G T A A C T G C G T A
A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:3
Score:0.62
Offset:1
Orientation:forward strand
Alignment:AAACTTGGCCAGA
-AAYTAGGTCA--
 C G T A C G T A C G T A G T A C A C G T A C G T A C T G A C T G A G T C G T A C C G T A A C T G C G T A
A C G T G C T A C G T A A G T C A C G T T C G A T A C G A C T G A G C T A G T C T C G A A C G T A C G T

NFIA/MA0670.1/Jaspar

Match Rank:4
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:AAACTTGGCCAGA
--NNTTGGCANN-
 C G T A C G T A C G T A G T A C A C G T A C G T A C T G A C T G A G T C G T A C C G T A A C T G C G T A
A C G T A C G T G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C A C G T

RORA(var.2)/MA0072.1/Jaspar

Match Rank:5
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--AAACTTGGCCAGA
TATAAGTAGGTCAA-
 A C G T A C G T C G T A C G T A C G T A G T A C A C G T A C G T A C T G A C T G A G T C G T A C C G T A A C T G C G T A
C G A T C G T A C G A T G T C A C G T A A T C G A C G T C T G A A C T G A C T G A C G T A G T C C G T A T C G A A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:6
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:AAACTTGGCCAGA
---CTTGGCAA--
 C G T A C G T A C G T A G T A C A C G T A C G T A C T G A C T G A G T C G T A C C G T A A C T G C G T A
A C G T A C G T A C G T A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A A C G T A C G T

Nr2e3/MA0164.1/Jaspar

Match Rank:7
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:AAACTTGGCCAGA
AAGCTTG------
 C G T A C G T A C G T A G T A C A C G T A C G T A C T G A C T G A G T C G T A C C G T A A C T G C G T A
C G T A C G T A A C T G A T G C A C G T A C G T C T A G A C G T A C G T A C G T A C G T A C G T A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:AAACTTGGCCAGA--
-----TGCCCAGNHW
 C G T A C G T A C G T A G T A C A C G T A C G T A C T G A C T G A G T C G T A C C G T A A C T G C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:9
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:AAACTTGGCCAGA--
-----ATGCCAGACN
 C G T A C G T A C G T A G T A C A C G T A C G T A C T G A C T G A G T C G T A C C G T A A C T G C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C

Creb3l2/MA0608.1/Jaspar

Match Rank:10
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:AAACTTGGCCAGA
ACACGTGGC----
 C G T A C G T A C G T A G T A C A C G T A C G T A C T G A C T G A G T C G T A C C G T A A C T G C G T A
G C T A A T G C C G T A A G T C A C T G A C G T A T C G C A T G G T A C A C G T A C G T A C G T A C G T