Information for 11-RCCASCTCARTST (Motif 16)

C T A G A G T C G T A C C G T A A T G C A G T C G A C T A G T C C G T A C T A G A C G T A T G C A C G T
Reverse Opposite:
C G T A A T C G C G T A A G T C A C G T A C T G C G T A A C T G A T C G A C G T A C T G A C T G A G T C
p-value:1e-10
log p-value:-2.345e+01
Information Content per bp:1.870
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.86%
Number of Background Sequences with motif7.7
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets35.7 +/- 21.9bp
Average Position of motif in Background49.6 +/- 6.9bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0152.1_Pou6f1_2/Jaspar

Match Rank:1
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:RCCASCTCARTST----
GCAACCTCATTATNNNN
 C T A G A G T C G T A C C G T A A T G C A G T C G A C T A G T C C G T A C T A G A C G T A T G C A C G T A C G T A C G T A C G T A C G T
C A T G G T A C G T C A C G T A A T G C G T A C A C G T G T A C C G T A A C G T C G A T C G T A C G A T A T C G C G A T C A G T A G C T

PH0151.1_Pou6f1_1/Jaspar

Match Rank:2
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:RCCASCTCARTST----
NNNACCTCATTATCNTN
 C T A G A G T C G T A C C G T A A T G C A G T C G A C T A G T C C G T A C T A G A C G T A T G C A C G T A C G T A C G T A C G T A C G T
C A T G G A T C G T C A C G T A T A C G G T A C A C G T G T A C C G T A C G A T C G A T C G T A C G A T A T G C A C T G C G A T A G T C

PH0114.1_Nkx2-5/Jaspar

Match Rank:3
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---RCCASCTCARTST
TAAGCCACTTGAATTT
 A C G T A C G T A C G T C T A G A G T C G T A C C G T A A T G C A G T C G A C T A G T C C G T A C T A G A C G T A T G C A C G T
G A C T C T G A C T G A C A T G T A G C A G T C G C T A G T A C A C G T G A C T T C A G C G T A T C G A G C A T G A C T A G C T

CREB3/MA0638.1/Jaspar

Match Rank:4
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--RCCASCTCARTST
GTGCCACGTCATCA-
 A C G T A C G T C T A G A G T C G T A C C G T A A T G C A G T C G A C T A G T C C G T A C T A G A C G T A T G C A C G T
T C A G A G C T C A T G G T A C A T G C C G T A A G T C C T A G G A C T T G A C C T G A A G C T G T A C T C G A A C G T

XBP1/MA0844.1/Jaspar

Match Rank:5
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---RCCASCTCARTST
AATGCCACGTCATC--
 A C G T A C G T A C G T C T A G A G T C G T A C C G T A A T G C A G T C G A C T A G T C C G T A C T A G A C G T A T G C A C G T
C G T A C T G A A C G T C A T G G T A C A G T C C T G A G A T C C T A G A G C T T G A C C T G A A C G T A G T C A C G T A C G T

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:6
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-RCCASCTCARTST
TGACACCT------
 A C G T C T A G A G T C G T A C C G T A A T G C A G T C G A C T A G T C C G T A C T A G A C G T A T G C A C G T
G A C T T C A G C T G A A G T C C T G A T A G C G A T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T

POL002.1_INR/Jaspar

Match Rank:7
Score:0.54
Offset:6
Orientation:forward strand
Alignment:RCCASCTCARTST-
------TCAGTCTT
 C T A G A G T C G T A C C G T A A T G C A G T C G A C T A G T C C G T A C T A G A C G T A T G C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A G T A G T C C G T A A T C G G A C T G A T C A G C T A G C T

CREB3L1/MA0839.1/Jaspar

Match Rank:8
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--RCCASCTCARTST
ATGCCACGTCATCA-
 A C G T A C G T C T A G A G T C G T A C C G T A A T G C A G T C G A C T A G T C C G T A C T A G A C G T A T G C A C G T
T C G A G A C T C T A G G T A C G A T C C T G A A T G C T C A G C G A T T G A C C T G A A G C T G A T C C T G A A C G T

SREBF2/MA0596.1/Jaspar

Match Rank:9
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:RCCASCTCARTST
ATCACCCCAT---
 C T A G A G T C G T A C C G T A A T G C A G T C G A C T A G T C C G T A C T A G A C G T A T G C A C G T
C T G A A C G T A G T C C G T A A T G C T A G C A G T C A T G C C G T A A G C T A C G T A C G T A C G T

POU6F2/MA0793.1/Jaspar

Match Rank:10
Score:0.53
Offset:3
Orientation:forward strand
Alignment:RCCASCTCARTST
---AGCTCATTAT
 C T A G A G T C G T A C C G T A A T G C A G T C G A C T A G T C C G T A C T A G A C G T A T G C A C G T
A C G T A C G T A C G T C T G A T A C G G A T C C A G T G T A C G T C A A G C T A C G T G C T A G C A T