Information for 3-CCGAGTTCCCTAGCAC (Motif 9)

A G T C A G T C A T C G G T C A A T C G A C G T A G C T A T G C A G T C A G T C A G C T G T C A A C T G A G T C C G T A A G T C
Reverse Opposite:
A C T G A C G T A C T G A G T C A C G T C T G A A C T G A C T G A T C G C T G A G T C A A T G C A C G T A T G C A C T G A C T G
p-value:1e-13
log p-value:-3.089e+01
Information Content per bp:1.909
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.72%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets46.7 +/- 8.8bp
Average Position of motif in Background26.8 +/- 8.9bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer

Match Rank:1
Score:0.57
Offset:3
Orientation:forward strand
Alignment:CCGAGTTCCCTAGCAC--
---TGTTKCCTAGCAACM
 A G T C A G T C A T C G G T C A A T C G A C G T A G C T A T G C A G T C A G T C A G C T G T C A A C T G A G T C C G T A A G T C A C G T A C G T
A C G T A C G T A C G T C A G T T C A G A G C T G A C T A C G T A G T C G A T C G A C T C T G A A C T G G A T C C G T A C T G A A G T C G T A C

STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer

Match Rank:2
Score:0.54
Offset:5
Orientation:forward strand
Alignment:CCGAGTTCCCTAGCAC
-----TTCCKNAGAA-
 A G T C A G T C A T C G G T C A A T C G A C G T A G C T A T G C A G T C A G T C A G C T G T C A A C T G A G T C C G T A A G T C
A C G T A C G T A C G T A C G T A C G T G A C T C A G T G A T C G A T C A C G T G A T C C T G A T A C G C G T A G T C A A C G T

PB0055.1_Rfx4_1/Jaspar

Match Rank:3
Score:0.52
Offset:5
Orientation:forward strand
Alignment:CCGAGTTCCCTAGCAC----
-----TACCATAGCAACGGT
 A G T C A G T C A T C G G T C A A T C G A C G T A G C T A T G C A G T C A G T C A G C T G T C A A C T G A G T C C G T A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G C T G T C A T A G C A T G C G T C A A G C T T C G A C T A G G A T C C T G A C T G A A G T C T A C G T C A G C G A T

PB0054.1_Rfx3_1/Jaspar

Match Rank:4
Score:0.51
Offset:1
Orientation:forward strand
Alignment:CCGAGTTCCCTAGCAC--------
-TGTGACCCTTAGCAACCGATTAA
 A G T C A G T C A T C G G T C A A T C G A C G T A G C T A T G C A G T C A G T C A G C T G T C A A C T G A G T C C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G A C T C A T G A G C T A T C G G T C A G A T C T G A C A T G C G A C T A G C T T C G A C T A G G A T C C T G A C G T A A G T C T A G C T C A G C G T A G C A T G C A T G C T A G C T A

PB0124.1_Gabpa_2/Jaspar

Match Rank:5
Score:0.50
Offset:0
Orientation:forward strand
Alignment:CCGAGTTCCCTAGCAC
CCGTCTTCCCCCTCAC
 A G T C A G T C A T C G G T C A A T C G A C G T A G C T A T G C A G T C A G T C A G C T G T C A A C T G A G T C C G T A A G T C
T G A C A G T C C A T G A C G T G A T C G C A T G A C T G A T C A G T C A T G C G T A C G A T C A G C T T A G C T G C A G A T C

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:6
Score:0.49
Offset:3
Orientation:forward strand
Alignment:CCGAGTTCCCTAGCAC
---AGGTCTCTAACC-
 A G T C A G T C A T C G G T C A A T C G A C G T A G C T A T G C A G T C A G T C A G C T G T C A A C T G A G T C C G T A A G T C
A C G T A C G T A C G T C T G A T C A G A C T G C A G T A G T C G A C T A G T C A C G T C G T A G C T A A T G C G A T C A C G T

STAT6(Stat)/CD4-Stat6-ChIP-Seq(GSE22104)/Homer

Match Rank:7
Score:0.49
Offset:3
Orientation:forward strand
Alignment:CCGAGTTCCCTAGCAC
---ANTTCTNNAGAA-
 A G T C A G T C A T C G G T C A A T C G A C G T A G C T A T G C A G T C A G T C A G C T G T C A A C T G A G T C C G T A A G T C
A C G T A C G T A C G T C T G A A G C T A C G T A C G T A G T C G A C T G A C T C T G A C T G A C T A G C G T A C G T A A C G T

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.48
Offset:7
Orientation:forward strand
Alignment:CCGAGTTCCCTAGCAC---
-------SCCTAGCAACAG
 A G T C A G T C A T C G G T C A A T C G A C G T A G C T A T G C A G T C A G T C A G C T G T C A A C T G A G T C C G T A A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C G T A C A G C T T C G A C T A G G A T C C T G A G T C A A G T C G C T A T C A G

Stat6/MA0520.1/Jaspar

Match Rank:9
Score:0.48
Offset:3
Orientation:reverse strand
Alignment:CCGAGTTCCCTAGCAC--
---ANTTCTCAGGAANNN
 A G T C A G T C A T C G G T C A A T C G A C G T A G C T A T G C A G T C A G T C A G C T G T C A A C T G A G T C C G T A A G T C A C G T A C G T
A C G T A C G T A C G T C T G A A C G T A G C T A C G T G T A C G A C T A T G C G C T A C T A G C A T G C G T A C G T A T C G A G C A T T A C G

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:10
Score:0.47
Offset:5
Orientation:forward strand
Alignment:CCGAGTTCCCTAGCAC----
-----CCGCATAGCAACGGA
 A G T C A G T C A T C G G T C A A T C G A C G T A G C T A T G C A G T C A G T C A G C T G T C A A C T G A G T C C G T A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G T C A G T C T A C G A T G C G C T A G A C T T C G A C T A G G A T C C T G A T C G A A G T C T A C G T C A G C T G A