Information for 6-GTCACCCAGACGTGGC (Motif 13)

A C T G A G C T A G T C C G T A A G T C A T G C G A T C C G T A C T A G C G T A A T G C A C T G A C G T A C T G A C T G A T G C
Reverse Opposite:
A T C G A G T C A G T C C G T A A G T C A T C G C G A T A G T C A C G T C T A G A T C G C T A G A C G T A C T G C T G A A G T C
p-value:1e-10
log p-value:-2.504e+01
Information Content per bp:1.910
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.60%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets39.0 +/- 16.1bp
Average Position of motif in Background90.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:1
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GTCACCCAGACGTGGC
-SCAGYCADGCATGAC
 A C T G A G C T A G T C C G T A A G T C A T G C G A T C C G T A C T A G C G T A A T G C A C T G A C G T A C T G A C T G A T G C
A C G T A T C G G T A C C G T A A T C G A G C T A T G C C G T A C T A G A T C G A G T C T C G A C A G T T C A G T C G A T G A C

Creb3l2/MA0608.1/Jaspar

Match Rank:2
Score:0.59
Offset:7
Orientation:reverse strand
Alignment:GTCACCCAGACGTGGC
-------ACACGTGGC
 A C T G A G C T A G T C C G T A A G T C A T G C G A T C C G T A C T A G C G T A A T G C A C T G A C G T A C T G A C T G A T G C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A A T G C C G T A A G T C A C T G A C G T A T C G C A T G G T A C

PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GTCACCCAGACGTGGC-
-GCAGCCAAGCGTGACN
 A C T G A G C T A G T C C G T A A G T C A T G C G A T C C G T A C T A G C G T A A T G C A C T G A C G T A C T G A C T G A T G C A C G T
A C G T A C T G G A T C C T G A A T C G A G T C T A G C C T G A C G T A T A C G A G T C C T A G C A G T T C A G T C G A T G A C G A T C

ZBTB18/MA0698.1/Jaspar

Match Rank:4
Score:0.57
Offset:2
Orientation:forward strand
Alignment:GTCACCCAGACGTGGC
--CATCCAGATGTTC-
 A C T G A G C T A G T C C G T A A G T C A T G C G A T C C G T A C T A G C G T A A T G C A C T G A C G T A C T G A C T G A T G C
A C G T A C G T G T A C C G T A A C G T T G A C G T A C C G T A A T C G G T C A A C G T C T A G G A C T C A G T A G T C A C G T

ESR2/MA0258.2/Jaspar

Match Rank:5
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GTCACCCAGACGTGGC
AGGTCACCCTGACCT---
 A C G T A C G T A C T G A G C T A G T C C G T A A G T C A T G C G A T C C G T A C T A G C G T A A T G C A C T G A C G T A C T G A C T G A T G C
C T G A C A T G C T A G A C G T A T G C C G T A A T G C T G A C T A G C G C A T T C A G G T C A G A T C G A T C G A C T A C G T A C G T A C G T

PAX5/MA0014.2/Jaspar

Match Rank:6
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---GTCACCCAGACGTGGC
GAGGGCAGCCAAGCGTGAC
 A C G T A C G T A C G T A C T G A G C T A G T C C G T A A G T C A T G C G A T C C G T A C T A G C G T A A T G C A C T G A C G T A C T G A C T G A T G C
T C A G C G T A T C A G C T A G A C T G G A T C C T G A T A C G A G T C T A G C T C G A C T G A A T C G A G T C C T A G C A G T C T A G C T G A G T A C

CREB3L1/MA0839.1/Jaspar

Match Rank:7
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:GTCACCCAGACGTGGC--
----TGATGACGTGGCAN
 A C T G A G C T A G T C C G T A A G T C A T G C G A T C C G T A C T A G C G T A A T G C A C T G A C G T A C T G A C T G A T G C A C G T A C G T
A C G T A C G T A C G T A C G T G A C T C T A G T C G A G A C T A C T G G C T A A G T C A T C G A G C T C T A G C A T G G A T C C T G A A G C T

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:8
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:GTCACCCAGACGTGGC--
---TCCCAGMCRAGCCCC
 A C T G A G C T A G T C C G T A A G T C A T G C G A T C C G T A C T A G C G T A A T G C A C T G A C G T A C T G A C T G A T G C A C G T A C G T
A C G T A C G T A C G T A G C T A G T C A G T C A G T C C T G A T C A G T G C A G A T C T C G A C G T A A C T G A T G C G T A C G T A C G A T C

ESR1/MA0112.3/Jaspar

Match Rank:9
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---GTCACCCAGACGTGGC
AAGGTCACGGTGACCTG--
 A C G T A C G T A C G T A C T G A G C T A G T C C G T A A G T C A T G C G A T C C G T A C T A G C G T A A T G C A C T G A C G T A C T G A C T G A T G C
C T G A T C G A A C T G C T A G A C G T G A T C C T G A T G A C T A C G T C A G A G C T C T A G T C G A A T G C G T A C A G C T A C T G A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:GTCACCCAGACGTGGC
-----CCAGACRSVB-
 A C T G A G C T A G T C C G T A A G T C A T G C G A T C C G T A C T A G C G T A A T G C A C T G A C G T A C T G A C T G A T G C
A C G T A C G T A C G T A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C A C G T