Information for 4-CCTGTGGTGA (Motif 20)

G T A C A G T C C G A T A C T G C G A T T C A G A C T G C G A T A C T G T G C A
Reverse Opposite:
A C G T A G T C G C T A T G A C A G T C G C T A A G T C C G T A T C A G A C T G
p-value:1e-8
log p-value:-1.931e+01
Information Content per bp:1.829
Number of Target Sequences with motif26.0
Percentage of Target Sequences with motif3.16%
Number of Background Sequences with motif348.6
Percentage of Background Sequences with motif0.78%
Average Position of motif in Targets51.4 +/- 27.7bp
Average Position of motif in Background49.4 +/- 34.6bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:1
Score:0.76
Offset:0
Orientation:forward strand
Alignment:CCTGTGGTGA
GCTGTGGTTT
 G T A C A G T C C G A T A C T G C G A T T C A G A C T G C G A T A C T G T G C A
A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:2
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-CCTGTGGTGA-
NNHTGTGGTTWN
 A C G T G T A C A G T C C G A T A C T G C G A T T C A G A C T G C G A T A C T G T G C A A C G T
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:3
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:CCTGTGGTGA-
-CTGTGGTTTN
 G T A C A G T C C G A T A C T G C G A T T C A G A C T G C G A T A C T G T G C A A C G T
A C G T G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G

RUNX1/MA0002.2/Jaspar

Match Rank:4
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-CCTGTGGTGA
GTCTGTGGTTT
 A C G T G T A C A G T C C G A T A C T G C G A T T C A G A C T G C G A T A C T G T G C A
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T

SREBF2/MA0596.1/Jaspar

Match Rank:5
Score:0.69
Offset:1
Orientation:forward strand
Alignment:CCTGTGGTGA-
-ATGGGGTGAT
 G T A C A G T C C G A T A C T G C G A T T C A G A C T G C G A T A C T G T G C A A C G T
A C G T T C G A A C G T A T C G C T A G A T C G T A C G A C G T A C T G C G T A A G C T

SREBF1/MA0595.1/Jaspar

Match Rank:6
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:CCTGTGGTGA-
-GTGGGGTGAT
 G T A C A G T C C G A T A C T G C G A T T C A G A C T G C G A T A C T G T G C A A C G T
A C G T T C A G A C G T A T C G C T A G A T C G A T C G A C G T A C T G C G T A A G C T

POL009.1_DCE_S_II/Jaspar

Match Rank:7
Score:0.66
Offset:0
Orientation:forward strand
Alignment:CCTGTGGTGA
GCTGTG----
 G T A C A G T C C G A T A C T G C G A T T C A G A C T G C G A T A C T G T G C A
T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CCTGTGGTGA-
-ATGGGGTGAT
 G T A C A G T C C G A T A C T G C G A T T C A G A C T G C G A T A C T G T G C A A C G T
A C G T T C G A A G C T C A T G A C T G A T C G T A C G G A C T A T C G C G T A A G C T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:9
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CCTGTGGTGA
NNTGTGGTTT
 G T A C A G T C C G A T A C T G C G A T T C A G A C T G C G A T A C T G T G C A
A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:10
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---CCTGTGGTGA
CCCCCTGCTGTG-
 A C G T A C G T A C G T G T A C A G T C C G A T A C T G C G A T T C A G A C T G C G A T A C T G T G C A
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T