Information for 1-RCCAGGCAGGCACCTG (Motif 2)

T C G A T G A C G T A C C G T A A C T G A T C G G T A C C G T A A C T G A T C G T G A C C T G A A T G C T G A C C A G T A T C G
Reverse Opposite:
A T G C G T C A A C T G T A C G G A C T A C T G A T G C A G T C C G A T A C T G A T G C A G T C A C G T A C T G A C T G A G C T
p-value:1e-13
log p-value:-3.009e+01
Information Content per bp:1.748
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif1.82%
Number of Background Sequences with motif50.6
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets46.0 +/- 24.6bp
Average Position of motif in Background38.2 +/- 33.5bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.13
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.61
Offset:2
Orientation:forward strand
Alignment:RCCAGGCAGGCACCTG
--AAGGCAAGTGT---
 T C G A T G A C G T A C C G T A A C T G A T C G G T A C C G T A A C T G A T C G T G A C C T G A A T G C T G A C C A G T A T C G
A C G T A C G T T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T A C G T A C G T A C G T

ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer

Match Rank:2
Score:0.60
Offset:0
Orientation:forward strand
Alignment:RCCAGGCAGGCACCTG
ANCAGGAAGT------
 T C G A T G A C G T A C C G T A A C T G A T C G G T A C C G T A A C T G A T C G T G A C C T G A A T G C T G A C C A G T A T C G
C G T A T G A C T A G C T G C A A C T G A C T G C G T A C G T A T C A G G A C T A C G T A C G T A C G T A C G T A C G T A C G T

EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer

Match Rank:3
Score:0.59
Offset:0
Orientation:forward strand
Alignment:RCCAGGCAGGCACCTG
AVCAGGAAGT------
 T C G A T G A C G T A C C G T A A C T G A T C G G T A C C G T A A C T G A T C G T G A C C T G A A T G C T G A C C A G T A T C G
C G T A T A G C T A G C T G C A A C T G C T A G C G T A C G T A T C A G G A C T A C G T A C G T A C G T A C G T A C G T A C G T

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:4
Score:0.59
Offset:1
Orientation:forward strand
Alignment:RCCAGGCAGGCACCTG
-ACAGGAAGTG-----
 T C G A T G A C G T A C C G T A A C T G A T C G G T A C C G T A A C T G A T C G T G A C C T G A A T G C T G A C C A G T A T C G
A C G T T C G A T A G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T T C A G A C G T A C G T A C G T A C G T A C G T

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:5
Score:0.58
Offset:0
Orientation:forward strand
Alignment:RCCAGGCAGGCACCTG
AACAGGAAGT------
 T C G A T G A C G T A C C G T A A C T G A T C G G T A C C G T A A C T G A T C G T G A C C T G A A T G C T G A C C A G T A T C G
T G C A C T G A A T G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T A C G T A C G T A C G T A C G T A C G T A C G T

ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer

Match Rank:6
Score:0.56
Offset:0
Orientation:forward strand
Alignment:RCCAGGCAGGCACCTG
ACVAGGAAGT------
 T C G A T G A C G T A C C G T A A C T G A T C G G T A C C G T A A C T G A T C G T G A C C T G A A T G C T G A C C A G T A T C G
G C T A A G T C T A C G T G C A A T C G T C A G G C T A T C G A T C A G A G C T A C G T A C G T A C G T A C G T A C G T A C G T

ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer

Match Rank:7
Score:0.56
Offset:0
Orientation:forward strand
Alignment:RCCAGGCAGGCACCTG
AACCGGAAGT------
 T C G A T G A C G T A C C G T A A C T G A T C G G T A C C G T A A C T G A T C G T G A C C T G A A T G C T G A C C A G T A T C G
T C G A C T G A T A G C T G A C T C A G T C A G C G T A C G T A T C A G A G C T A C G T A C G T A C G T A C G T A C G T A C G T

ELF5/MA0136.2/Jaspar

Match Rank:8
Score:0.54
Offset:0
Orientation:forward strand
Alignment:RCCAGGCAGGCACCTG
ACCCGGAAGTA-----
 T C G A T G A C G T A C C G T A A C T G A T C G G T A C C G T A A C T G A T C G T G A C C T G A A T G C T G A C C A G T A T C G
C G T A T G A C T A G C T G A C C A T G C A T G G T C A G C T A T C A G G A C T C T G A A C G T A C G T A C G T A C G T A C G T

Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)

Match Rank:9
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:RCCAGGCAGGCACCTG
NDCAGGAARTNN----
 T C G A T G A C G T A C C G T A A C T G A T C G G T A C C G T A A C T G A T C G T G A C C T G A A T G C T G A C C A G T A T C G
T G C A C T G A T A G C G T C A A C T G A C T G C G T A G C T A T C A G G A C T T C A G T A C G A C G T A C G T A C G T A C G T

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:10
Score:0.54
Offset:2
Orientation:forward strand
Alignment:RCCAGGCAGGCACCTG
--CWGGCGGGAA----
 T C G A T G A C G T A C C G T A A C T G A T C G G T A C C G T A A C T G A T C G T G A C C T G A A T G C T G A C C A G T A T C G
A C G T A C G T T A G C C G A T T A C G A C T G A G T C A C T G A T C G A T C G C G T A C T G A A C G T A C G T A C G T A C G T