Information for 2-GCCATATATG (Motif 13)

T A C G G A T C A G T C C G T A C G A T C T G A A C G T C T G A A C G T A C T G
Reverse Opposite:
A G T C C G T A A G C T C G T A A G C T C G T A C G A T A C T G C A T G A T G C
p-value:1e-10
log p-value:-2.358e+01
Information Content per bp:1.848
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.97%
Number of Background Sequences with motif11.6
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets54.3 +/- 13.8bp
Average Position of motif in Background48.8 +/- 27.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SRF/MA0083.3/Jaspar

Match Rank:1
Score:0.83
Offset:-2
Orientation:reverse strand
Alignment:--GCCATATATG----
TGNCCATATATGGTCA
 A C G T A C G T T A C G G A T C A G T C C G T A C G A T C T G A A C G T C T G A A C G T A C T G A C G T A C G T A C G T A C G T
G C A T A C T G G T C A G A T C A T G C C G T A C G A T T G C A A G C T G C T A G C A T T C A G A T C G C A G T T G A C C G T A

CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan_et_al.)/Homer

Match Rank:2
Score:0.82
Offset:-1
Orientation:reverse strand
Alignment:-GCCATATATG-
TNCCATATATGG
 A C G T T A C G G A T C A G T C C G T A C G A T C T G A A C G T C T G A A C G T A C T G A C G T
C A G T A C T G G A T C A G T C G C T A C G A T C G T A G C A T G C T A C G A T C T A G A T C G

PB0078.1_Srf_1/Jaspar

Match Rank:3
Score:0.79
Offset:-1
Orientation:reverse strand
Alignment:-GCCATATATG---
TNCCATATATGGNA
 A C G T T A C G G A T C A G T C C G T A C G A T C T G A A C G T C T G A A C G T A C T G A C G T A C G T A C G T
C A G T C G A T G T A C A G T C C G T A C G A T C G T A G C A T C G T A C G A T C T A G C A T G C G T A C G T A

MF0008.1_MADS_class/Jaspar

Match Rank:4
Score:0.78
Offset:1
Orientation:forward strand
Alignment:GCCATATATG-
-CCATATATGG
 T A C G G A T C A G T C C G T A C G A T C T G A A C G T C T G A A C G T A C T G A C G T
A C G T G A T C A G T C G C T A C G A T C G T A C G A T C G T A G C A T C T A G C A T G

Twist2/MA0633.1/Jaspar

Match Rank:5
Score:0.73
Offset:0
Orientation:forward strand
Alignment:GCCATATATG
ACCATATGTT
 T A C G G A T C A G T C C G T A C G A T C T G A A C G T C T G A A C G T A C T G
C T G A G T A C A G T C C G T A A G C T C T G A A C G T A C T G A C G T A C G T

Bhlha15/MA0607.1/Jaspar

Match Rank:6
Score:0.70
Offset:1
Orientation:forward strand
Alignment:GCCATATATG
-CCATATGT-
 T A C G G A T C A G T C C G T A C G A T C T G A A C G T C T G A A C G T A C T G
A C G T T A G C A G T C C G T A A C G T G T C A A C G T A C T G A G C T A C G T

Atoh1/MA0461.2/Jaspar

Match Rank:7
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:GCCATATATG
ANCATATGTT
 T A C G G A T C A G T C C G T A C G A T C T G A A C G T C T G A A C G T A C T G
C T G A T G C A G T A C G C T A A C G T G T C A A G C T A C T G A C G T A G C T

NEUROG2/MA0669.1/Jaspar

Match Rank:8
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GCCATATATG
GACATATGTT
 T A C G G A T C A G T C C G T A C G A T C T G A A C G T C T G A A C G T A C T G
C T A G T C G A A G T C C G T A A C G T T G C A A G C T C T A G A C G T A G C T

PB0163.1_Six6_2/Jaspar

Match Rank:9
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GCCATATATG-----
ATGGGATATATCCGCCT
 A C G T A C G T T A C G G A T C A G T C C G T A C G A T C T G A A C G T C T G A A C G T A C T G A C G T A C G T A C G T A C G T A C G T
T G C A C G A T A T C G T A C G A C T G T C G A G A C T C T G A A C G T G T C A A G C T G T A C A G T C T C A G G A T C G A T C C A G T

Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer

Match Rank:10
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GCCATATATG-
GGCCATAAATCA
 A C G T T A C G G A T C A G T C C G T A C G A T C T G A A C G T C T G A A C G T A C T G A C G T
C T A G T A C G G A T C G T A C C T G A A G C T T G C A G C T A C G T A G C A T G A T C G C T A