Information for 7-YGSSTGASAGGMCMAG (Motif 12)

A G C T A C T G A T G C A T G C A C G T A C T G C G T A A T C G C G T A C T A G A C T G T G A C A G T C G T A C C G T A A C T G
Reverse Opposite:
A G T C A C G T A C T G C T A G A C G T A G T C A G T C A C G T A T G C C G A T A G T C C G T A A T C G A T C G A G T C C T G A
p-value:1e-10
log p-value:-2.401e+01
Information Content per bp:1.845
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.73%
Number of Background Sequences with motif3.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets41.0 +/- 18.9bp
Average Position of motif in Background82.9 +/- 12.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:1
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:YGSSTGASAGGMCMAG
TGAGTGACAGSC----
 A G C T A C T G A T G C A T G C A C G T A C T G C G T A A T C G C G T A C T A G A C T G T G A C A G T C G T A C C G T A A C T G
C G A T A T C G T C G A A C T G C G A T A T C G C T G A A G T C C G T A A T C G T A C G G A T C A C G T A C G T A C G T A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:2
Score:0.60
Offset:3
Orientation:forward strand
Alignment:YGSSTGASAGGMCMAG
---TTGACAGC-----
 A G C T A C T G A T G C A T G C A C G T A C T G C G T A A T C G C G T A C T A G A C T G T G A C A G T C G T A C C G T A A C T G
A C G T A C G T A C G T C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C A C G T A C G T A C G T A C G T A C G T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-YGSSTGASAGGMCMAG
NTGATTGACAGN-----
 A C G T A G C T A C T G A T G C A T G C A C G T A C T G C G T A A T C G C G T A C T A G A C T G T G A C A G T C G T A C C G T A A C T G
A C G T C G A T A T C G C G T A A C G T C A G T A C T G C T G A A G T C C T G A A T C G A T C G A C G T A C G T A C G T A C G T A C G T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:4
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:YGSSTGASAGGMCMAG
--VBTGWCAGCB----
 A G C T A C T G A T G C A T G C A C G T A C T G C G T A A T C G C G T A C T A G A C T G T G A C A G T C G T A C C G T A A C T G
A C G T A C G T T C A G A T G C A C G T A C T G C G T A A G T C C G T A A T C G A T G C A G T C A C G T A C G T A C G T A C G T

MEIS3/MA0775.1/Jaspar

Match Rank:5
Score:0.58
Offset:3
Orientation:forward strand
Alignment:YGSSTGASAGGMCMAG
---TTGACAGG-----
 A G C T A C T G A T G C A T G C A C G T A C T G C G T A A T C G C G T A C T A G A C T G T G A C A G T C G T A C C G T A A C T G
A C G T A C G T A C G T C G A T G C A T A T C G C T G A G A T C C T G A A C T G A T C G A C G T A C G T A C G T A C G T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:6
Score:0.57
Offset:7
Orientation:reverse strand
Alignment:YGSSTGASAGGMCMAG-----
-------CAGGCCNNGGCCNN
 A G C T A C T G A T G C A T G C A C G T A C T G C G T A A T C G C G T A C T A G A C T G T G A C A G T C G T A C C G T A A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:7
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-YGSSTGASAGGMCMAG
BTGABTGACAGS-----
 A C G T A G C T A C T G A T G C A T G C A C G T A C T G C G T A A T C G C G T A C T A G A C T G T G A C A G T C G T A C C G T A A C T G
A C G T C G A T A C T G C G T A A C G T A C G T A C T G C T G A A G T C C T G A T A C G A T G C A C G T A C G T A C G T A C G T A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:8
Score:0.55
Offset:8
Orientation:forward strand
Alignment:YGSSTGASAGGMCMAG
--------AGGCCTAG
 A G C T A C T G A T G C A T G C A C G T A C T G C G T A A T C G C G T A C T A G A C T G T G A C A G T C G T A C C G T A A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G

MEIS1/MA0498.2/Jaspar

Match Rank:9
Score:0.55
Offset:3
Orientation:forward strand
Alignment:YGSSTGASAGGMCMAG
---TTGACAG------
 A G C T A C T G A T G C A T G C A C G T A C T G C G T A A T C G C G T A C T A G A C T G T G A C A G T C G T A C C G T A A C T G
A C G T A C G T A C G T G C A T G C A T A T C G T G C A A G T C C T G A C T A G A C G T A C G T A C G T A C G T A C G T A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:10
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:YGSSTGASAGGMCMAG
--CTTGAGTGGCT---
 A G C T A C T G A T G C A T G C A C G T A C T G C G T A A T C G C G T A C T A G A C T G T G A C A G T C G T A C C G T A A C T G
A C G T A C G T A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T A C G T A C G T A C G T