Information for 12-AGTTTCGTGC (Motif 20)

C G T A A C T G A C G T A C G T A C G T A G T C A C T G C G A T A C T G A G T C
Reverse Opposite:
A C T G A G T C C G T A A G T C A C T G C G T A C G T A C G T A A G T C A C G T
p-value:1e-9
log p-value:-2.117e+01
Information Content per bp:1.962
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.57%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets34.4 +/- 23.1bp
Average Position of motif in Background87.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0036.1_Irf6_1/Jaspar

Match Rank:1
Score:0.70
Offset:-5
Orientation:reverse strand
Alignment:-----AGTTTCGTGC--
NNNTTGGTTTCGNTNNN
 A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C G T A C G T A C G T A G T C A C T G C G A T A C T G A G T C A C G T A C G T
G C T A G T A C G C A T A C G T A G C T C T A G A C T G A C G T G C A T A C G T A G T C C T A G C T G A G A C T G A T C G C T A C A T G

PB0034.1_Irf4_1/Jaspar

Match Rank:2
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---AGTTTCGTGC--
TNTGGTTTCGATACN
 A C G T A C G T A C G T C G T A A C T G A C G T A C G T A C G T A G T C A C T G C G A T A C T G A G T C A C G T A C G T
G C A T A C G T G A C T C T A G A T C G C G A T C G A T A C G T A G T C C T A G C T G A G C A T G C T A G A T C A C T G

PB0035.1_Irf5_1/Jaspar

Match Rank:3
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--AGTTTCGTGC---
NTGGTTTCGGTTNNN
 A C G T A C G T C G T A A C T G A C G T A C G T A C G T A G T C A C T G C G A T A C T G A G T C A C G T A C G T A C G T
A G C T G A C T C T A G A C T G A C G T G C A T A G C T A G T C C T A G C T A G G A C T G C A T G A C T G C T A C G A T

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:4
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:AGTTTCGTGC--
--TTGCGTGCVA
 C G T A A C T G A C G T A C G T A C G T A G T C A C T G C G A T A C T G A G T C A C G T A C G T
A C G T A C G T A C G T C A G T A C T G A G T C T C A G C G A T C A T G G T A C T A G C C G T A

PB0037.1_Isgf3g_1/Jaspar

Match Rank:5
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--AGTTTCGTGC---
TNAGTTTCGATTTTN
 A C G T A C G T C G T A A C T G A C G T A C G T A C G T A G T C A C T G C G A T A C T G A G T C A C G T A C G T A C G T
C A G T G C A T C T G A A T C G C G A T G C A T A C G T A G T C C T A G C G T A C G A T G C A T G A C T G A C T A C T G

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-AGTTTCGTGC
TGGTTTCAGT-
 A C G T C G T A A C T G A C G T A C G T A C G T A G T C A C T G C G A T A C T G A G T C
G A C T C T A G T A C G C G A T G C A T A C G T T A G C T C G A A T C G C G A T A C G T

E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:AGTTTCGTGC-
-DTTTCCCGCC
 C G T A A C T G A C G T A C G T A C G T A G T C A C T G C G A T A C T G A G T C A C G T
A C G T C T G A G C A T G A C T C A G T A T G C A T G C A T G C A C T G A T G C A T G C

E2F(E2F)/Hela-CellCycle-Expression/Homer

Match Rank:8
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:AGTTTCGTGC---
-TTTTCGCGCGAA
 C G T A A C T G A C G T A C G T A C G T A G T C A C T G C G A T A C T G A G T C A C G T A C G T A C G T
A C G T G A C T A G C T A G C T A G C T A T G C A T C G A G T C A C T G A T G C A T C G T C G A T C G A

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:9
Score:0.60
Offset:0
Orientation:forward strand
Alignment:AGTTTCGTGC--
VDTTTCCCGCCA
 C G T A A C T G A C G T A C G T A C G T A G T C A C T G C G A T A C T G A G T C A C G T A C G T
T A G C C G A T A C G T A G C T A G C T A G T C A T G C A G T C A C T G A T G C A T G C G C T A

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:10
Score:0.59
Offset:3
Orientation:forward strand
Alignment:AGTTTCGTGC-
---TACGTGCV
 C G T A A C T G A C G T A C G T A C G T A G T C A C T G C G A T A C T G A G T C A C G T
A C G T A C G T A C G T A C G T C T G A G A T C A T C G G A C T T C A G G T A C T A G C