Motif 16

Information for 10-AKTCCCRCCCTCG (Motif 16)

Reverse Opposite:

p-value:	1e-10
log p-value:	-2.358e+01
Information Content per bp:	1.736
Number of Target Sequences with motif	17.0
Percentage of Target Sequences with motif	1.94%
Number of Background Sequences with motif	106.7
Percentage of Background Sequences with motif	0.23%
Average Position of motif in Targets	42.8 +/- 29.0bp
Average Position of motif in Background	54.0 +/- 28.0bp
Strand Bias (log2 ratio + to - strand density)	0.4
Multiplicity (# of sites on avg that occur together)	1.00
Motif File:	file (matrix) reverse opposite
SVG Files for Logos:	forward logo reverse opposite

Matches to Known Motifs

SP2/MA0516.1/Jaspar

Match Rank:	1
Score:	0.78
Offset:	1
Orientation:	forward strand
Alignment:	AKTCCCRCCCTCG--- -GCCCCGCCCCCTCCC

SP1/MA0079.3/Jaspar

Match Rank:	2
Score:	0.78
Offset:	1
Orientation:	forward strand
Alignment:	AKTCCCRCCCTCG -GCCCCGCCCCC-

E2F6/MA0471.1/Jaspar

Match Rank:	3
Score:	0.77
Offset:	-1
Orientation:	reverse strand
Alignment:	-AKTCCCRCCCTCG NCTTCCCGCCC---

E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer

Match Rank:	4
Score:	0.76
Offset:	0
Orientation:	reverse strand
Alignment:	AKTCCCRCCCTCG TTTCCCGCCMAV-

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:	5
Score:	0.74
Offset:	1
Orientation:	reverse strand
Alignment:	AKTCCCRCCCTCG -TTCCCGCCWG--

KLF5/MA0599.1/Jaspar

Match Rank:	6
Score:	0.74
Offset:	1
Orientation:	forward strand
Alignment:	AKTCCCRCCCTCG -GCCCCGCCCC--

E2F4/MA0470.1/Jaspar

Match Rank:	7
Score:	0.73
Offset:	-1
Orientation:	reverse strand
Alignment:	-AKTCCCRCCCTCG NNTTCCCGCCC---

EGR1/MA0162.2/Jaspar

Match Rank:	8
Score:	0.73
Offset:	1
Orientation:	forward strand
Alignment:	AKTCCCRCCCTCG-- -CCCCCGCCCCCGCC

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:	9
Score:	0.72
Offset:	-1
Orientation:	reverse strand
Alignment:	-AKTCCCRCCCTCG NYTTCCCGCC----

POL003.1_GC-box/Jaspar

Match Rank:	10
Score:	0.72
Offset:	-1
Orientation:	reverse strand
Alignment:	-AKTCCCRCCCTCG NAGCCCCGCCCCCN