Information for 7-GGATTTAAACCTA (Motif 12)

T C A G A C T G G T C A A C G T A C G T A C G T C G T A C G T A C G T A A G T C A G T C A C G T C T G A
Reverse Opposite:
A G C T C G T A A C T G A C T G C G A T A C G T A C G T C G T A C G T A C G T A A C G T G T A C A G T C
p-value:1e-11
log p-value:-2.623e+01
Information Content per bp:1.904
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets37.8 +/- 15.9bp
Average Position of motif in Background45.8 +/- 17.7bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

LIN54/MA0619.1/Jaspar

Match Rank:1
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:GGATTTAAACCTA
-NATTCAAAT---
 T C A G A C T G G T C A A C G T A C G T A C G T C G T A C G T A C G T A A G T C A G T C A C G T C T G A
A C G T C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T A C G T A C G T A C G T

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:2
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GGATTTAAACCTA
CGGTTTCAAA----
 A C G T T C A G A C T G G T C A A C G T A C G T A C G T C G T A C G T A C G T A A G T C A G T C A C G T C T G A
T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A A C G T A C G T A C G T A C G T

OTX2/MA0712.1/Jaspar

Match Rank:3
Score:0.62
Offset:4
Orientation:forward strand
Alignment:GGATTTAAACCTA
----TTAATCCT-
 T C A G A C T G G T C A A C G T A C G T A C G T C G T A C G T A C G T A A G T C A G T C A C G T C T G A
A C G T A C G T A C G T A C G T G A C T G C A T C G T A C G T A C A G T G A T C A G T C A C G T A C G T

PH0124.1_Obox5_1/Jaspar

Match Rank:4
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GGATTTAAACCTA---
NANANTTAATCCCNNNN
 A C G T T C A G A C T G G T C A A C G T A C G T A C G T C G T A C G T A C G T A A G T C A G T C A C G T C T G A A C G T A C G T A C G T
C A T G C G T A C T G A C T G A C G A T G C A T C G A T C G T A C G T A C G A T G A T C A G T C A G T C A G C T A G T C G A C T C G T A

Pitx1/MA0682.1/Jaspar

Match Rank:5
Score:0.61
Offset:4
Orientation:forward strand
Alignment:GGATTTAAACCTA
----TTAATCCC-
 T C A G A C T G G T C A A C G T A C G T A C G T C G T A C G T A C G T A A G T C A G T C A C G T C T G A
A C G T A C G T A C G T A C G T G A C T G C A T T C G A C G T A C A G T G A T C G A T C G T A C A C G T

TBX20/MA0689.1/Jaspar

Match Rank:6
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:GGATTTAAACCTA
--CTTCACACCTA
 T C A G A C T G G T C A A C G T A C G T A C G T C G T A C G T A C G T A A G T C A G T C A C G T C T G A
A C G T A C G T A G T C G C A T G C A T G T A C G T C A T G A C G T C A G T A C A G T C G A C T G C T A

PH0125.1_Obox5_2/Jaspar

Match Rank:7
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GGATTTAAACCTA---
GATAATTAATCCCTCTT
 A C G T T C A G A C T G G T C A A C G T A C G T A C G T C G T A C G T A C G T A A G T C A G T C A C G T C T G A A C G T A C G T A C G T
A C T G C G T A A G C T C T G A C G T A G C A T C G A T C G T A C G T A C A G T G T A C A G T C A G T C A G C T A G T C G A C T A G C T

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:8
Score:0.60
Offset:5
Orientation:forward strand
Alignment:GGATTTAAACCTA
-----TAATCCCN
 T C A G A C T G G T C A A C G T A C G T A C G T C G T A C G T A C G T A A G T C A G T C A C G T C T G A
A C G T A C G T A C G T A C G T A C G T C G A T C T G A C G T A C A G T A G T C G A T C G A T C A C T G

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:9
Score:0.59
Offset:3
Orientation:forward strand
Alignment:GGATTTAAACCTA
---NYTAATCCYB
 T C A G A C T G G T C A A C G T A C G T A C G T C G T A C G T A C G T A A G T C A G T C A C G T C T G A
A C G T A C G T A C G T A T C G G A C T C G A T C G T A C G T A C A G T G A T C G A T C G A T C A G C T

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:10
Score:0.59
Offset:2
Orientation:forward strand
Alignment:GGATTTAAACCTA
--ATTAACACCT-
 T C A G A C T G G T C A A C G T A C G T A C G T C G T A C G T A C G T A A G T C A G T C A C G T C T G A
A C G T A C G T G C T A G A C T G A C T T G C A C G T A A G T C C G T A T A G C G A T C G A C T A C G T