Information for 5-ADGGGAATTCCCM (Motif 6)

T C G A C G A T C T A G A C T G T C A G G T C A C G T A C A G T A C G T A G T C G T A C A G T C G T A C
Reverse Opposite:
C A T G C T A G C A T G C T A G T C G A G T C A G C A T A C G T A G T C G T A C A G T C G C T A A G C T
p-value:1e-16
log p-value:-3.859e+01
Information Content per bp:1.654
Number of Target Sequences with motif30.0
Percentage of Target Sequences with motif3.73%
Number of Background Sequences with motif227.4
Percentage of Background Sequences with motif0.47%
Average Position of motif in Targets46.4 +/- 22.6bp
Average Position of motif in Background50.0 +/- 28.5bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:1
Score:0.87
Offset:0
Orientation:forward strand
Alignment:ADGGGAATTCCCM
NGGGGATTTCCC-
 T C G A C G A T C T A G A C T G T C A G G T C A C G T A C A G T A C G T A G T C G T A C A G T C G T A C
C G T A C A T G C A T G A C T G C T A G T C G A G C A T C G A T A G C T A G T C G A T C G T A C A C G T

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:2
Score:0.86
Offset:2
Orientation:reverse strand
Alignment:ADGGGAATTCCCM-
--GGGGATTCCCCC
 T C G A C G A T C T A G A C T G T C A G G T C A C G T A C A G T A C G T A G T C G T A C A G T C G T A C A C G T
A C G T A C G T A C T G C T A G C A T G T C A G G C T A G A C T A G C T A G T C A G T C G A T C G A T C A G T C

NFKB2/MA0778.1/Jaspar

Match Rank:3
Score:0.85
Offset:1
Orientation:forward strand
Alignment:ADGGGAATTCCCM-
-AGGGGATTCCCCT
 T C G A C G A T C T A G A C T G T C A G G T C A C G T A C A G T A C G T A G T C G T A C A G T C G T A C A C G T
A C G T T G C A T C A G A C T G C A T G C T A G T G C A G C A T G A C T G A T C G T A C G A T C G A T C A G C T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:4
Score:0.81
Offset:2
Orientation:forward strand
Alignment:ADGGGAATTCCCM
--GGAAATTCCC-
 T C G A C G A T C T A G A C T G T C A G G T C A C G T A C A G T A C G T A G T C G T A C A G T C G T A C
A C G T A C G T A C T G C A T G G C T A T C G A G C T A A G C T A G C T G T A C A G T C T G A C A C G T

MF0003.1_REL_class/Jaspar

Match Rank:5
Score:0.81
Offset:2
Orientation:forward strand
Alignment:ADGGGAATTCCCM
--GGGGATTTCC-
 T C G A C G A T C T A G A C T G T C A G G T C A C G T A C A G T A C G T A G T C G T A C A G T C G T A C
A C G T A C G T A T C G A C T G C A T G C T A G G C T A C G A T A G C T G A C T G A T C G T A C A C G T

NFKB1/MA0105.4/Jaspar

Match Rank:6
Score:0.81
Offset:1
Orientation:forward strand
Alignment:ADGGGAATTCCCM-
-AGGGGAATCCCCT
 T C G A C G A T C T A G A C T G T C A G G T C A C G T A C A G T A C G T A G T C G T A C A G T C G T A C A C G T
A C G T T G C A C T A G A T C G C A T G C T A G T C G A C G T A A G C T G A T C G T A C G T A C G A T C A C G T

REL/MA0101.1/Jaspar

Match Rank:7
Score:0.81
Offset:1
Orientation:forward strand
Alignment:ADGGGAATTCCCM
-GGGGATTTCC--
 T C G A C G A T C T A G A C T G T C A G G T C A C G T A C A G T A C G T A G T C G T A C A G T C G T A C
A C G T A T C G A C T G C A T G C T A G G T C A C G A T C G A T C G A T A G T C G T A C A C G T A C G T

RELA/MA0107.1/Jaspar

Match Rank:8
Score:0.80
Offset:2
Orientation:reverse strand
Alignment:ADGGGAATTCCCM
--GGAAATTCCC-
 T C G A C G A T C T A G A C T G T C A G G T C A C G T A C A G T A C G T A G T C G T A C A G T C G T A C
A C G T A C G T A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C A C G T

PB0133.1_Hic1_2/Jaspar

Match Rank:9
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----ADGGGAATTCCCM
NNNNTTGGGCACNNCN-
 A C G T A C G T A C G T A C G T T C G A C G A T C T A G A C T G T C A G G T C A C G T A C A G T A C G T A G T C G T A C A G T C G T A C
A G T C G A T C C A G T G C A T G C A T C A G T A C T G A C T G A C T G A G T C C G T A G A T C G T C A G T A C T A G C G T A C A C G T

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:10
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:ADGGGAATTCCCM-
----RCATTCCWGG
 T C G A C G A T C T A G A C T G T C A G G T C A C G T A C A G T A C G T A G T C G T A C A G T C G T A C A C G T
A C G T A C G T A C G T A C G T C T A G T G A C C G T A C G A T C G A T A G T C G T A C C G T A A T C G A T C G