Information for 6-TAACCACAAG (Motif 4)

C A G T G C T A T C G A T G A C G T A C G T C A T A G C G C T A C T G A T C A G
Reverse Opposite:
A G T C G A C T C G A T A T C G C A G T C A T G A C T G A G C T C G A T G T C A
p-value:1e-24
log p-value:-5.632e+01
Information Content per bp:1.660
Number of Target Sequences with motif92.0
Percentage of Target Sequences with motif11.43%
Number of Background Sequences with motif1539.8
Percentage of Background Sequences with motif3.21%
Average Position of motif in Targets52.2 +/- 24.8bp
Average Position of motif in Background50.9 +/- 29.9bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:1
Score:0.87
Offset:-1
Orientation:forward strand
Alignment:-TAACCACAAG
NAAACCACAG-
 A C G T C A G T G C T A T C G A T G A C G T A C G T C A T A G C G C T A C T G A T C A G
T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:2
Score:0.87
Offset:-1
Orientation:forward strand
Alignment:-TAACCACAAG-
NWAACCACADNN
 A C G T C A G T G C T A T C G A T G A C G T A C G T C A T A G C G C T A C T G A T C A G A C G T
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:3
Score:0.86
Offset:0
Orientation:forward strand
Alignment:TAACCACAAG
AAACCACANN
 C A G T G C T A T C G A T G A C G T A C G T C A T A G C G C T A C T G A T C A G
G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:4
Score:0.86
Offset:0
Orientation:reverse strand
Alignment:TAACCACAAG
AAACCACAGC
 C A G T G C T A T C G A T G A C G T A C G T C A T A G C G C T A C T G A T C A G
G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C

RUNX1/MA0002.2/Jaspar

Match Rank:5
Score:0.85
Offset:0
Orientation:reverse strand
Alignment:TAACCACAAG-
AAACCACAGAN
 C A G T G C T A T C G A T G A C G T A C G T C A T A G C G C T A C T G A T C A G A C G T
G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

RUNX2/MA0511.2/Jaspar

Match Rank:6
Score:0.82
Offset:0
Orientation:forward strand
Alignment:TAACCACAAG
AAACCGCAA-
 C A G T G C T A T C G A T G A C G T A C G T C A T A G C G C T A C T G A T C A G
G C T A C T G A G T C A A G T C A G T C C T A G A G T C T G C A T C G A A C G T

RUNX3/MA0684.1/Jaspar

Match Rank:7
Score:0.81
Offset:0
Orientation:forward strand
Alignment:TAACCACAAG
AAACCGCAAA
 C A G T G C T A T C G A T G A C G T A C G T C A T A G C G C T A C T G A T C A G
G C T A T C G A T G C A G T A C A T G C T C A G A T G C T G C A T C G A G C T A

ZNF354C/MA0130.1/Jaspar

Match Rank:8
Score:0.66
Offset:1
Orientation:forward strand
Alignment:TAACCACAAG
-ATCCAC---
 C A G T G C T A T C G A T G A C G T A C G T C A T A G C G C T A C T G A T C A G
A C G T T G C A G C A T A G T C A G T C C G T A A T G C A C G T A C G T A C G T

Myc/MA0147.2/Jaspar

Match Rank:9
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:TAACCACAAG-
-AAGCACATGG
 C A G T G C T A T C G A T G A C G T A C G T C A T A G C G C T A C T G A T C A G A C G T
A C G T T C G A C T G A T A C G A G T C C G T A A G T C C T G A A C G T A C T G A C T G

PB0122.1_Foxk1_2/Jaspar

Match Rank:10
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-TAACCACAAG----
CAAACAACAACACCT
 A C G T C A G T G C T A T C G A T G A C G T A C G T C A T A G C G C T A C T G A T C A G A C G T A C G T A C G T A C G T
G T A C G C T A G T C A C T G A G A T C T G C A T C G A A G T C T C G A C G T A G A T C C G T A G A T C G T A C G A C T