Information for 3-AGAYWSAGATKAT (Motif 5)

C T G A A C T G C G T A A G T C C G T A A T C G C G T A A T C G C G T A A C G T A C G T C G T A A C G T
Reverse Opposite:
C G T A A C G T G T C A C G T A A C G T A T G C A C G T A T G C C G A T C T A G A C G T A G T C A G C T
p-value:1e-13
log p-value:-3.159e+01
Information Content per bp:1.875
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.80%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets58.7 +/- 26.7bp
Average Position of motif in Background12.6 +/- 2.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0126.1_Obox6/Jaspar

Match Rank:1
Score:0.60
Offset:0
Orientation:forward strand
Alignment:AGAYWSAGATKAT--
AAAAACGGATTATTG
 C T G A A C T G C G T A A G T C C G T A A T C G C G T A A T C G C G T A A C G T A C G T C G T A A C G T A C G T A C G T
G T C A G C T A C T G A G C T A C T A G T A G C C T A G A C T G G T C A A C G T G A C T C G T A C G A T G A C T A T C G

PB0185.1_Tcf1_2/Jaspar

Match Rank:2
Score:0.58
Offset:0
Orientation:forward strand
Alignment:AGAYWSAGATKAT-
TTGCCCGGATTAGG
 C T G A A C T G C G T A A G T C C G T A A T C G C G T A A T C G C G T A A C G T A C G T C G T A A C G T A C G T
C G A T A C G T T C A G G A T C T A G C A G T C T A C G A C T G C T G A C A G T A C G T C G T A C A T G C T A G

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:3
Score:0.57
Offset:5
Orientation:forward strand
Alignment:AGAYWSAGATKAT
-----RGGATTAR
 C T G A A C T G C G T A A G T C C G T A A T C G C G T A A T C G C G T A A C G T A C G T C G T A A C G T
A C G T A C G T A C G T A C G T A C G T T C A G C T A G C T A G T G C A C G A T C G A T C G T A C T A G

OTX2/MA0712.1/Jaspar

Match Rank:4
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:AGAYWSAGATKAT
-----NGGATTAA
 C T G A A C T G C G T A A G T C C G T A A T C G C G T A A T C G C G T A A C G T A C G T C G T A A C G T
A C G T A C G T A C G T A C G T A C G T T G C A T C A G C T A G G T C A A C G T G C A T C G T A C T G A

OTX1/MA0711.1/Jaspar

Match Rank:5
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:AGAYWSAGATKAT
-----CGGATTAN
 C T G A A C T G C G T A A G T C C G T A A T C G C G T A A T C G C G T A A C G T A C G T C G T A A C G T
A C G T A C G T A C G T A C G T A C G T T A G C T A C G A T C G G T C A A C G T G C A T C G T A C T G A

PH0017.1_Cux1_2/Jaspar

Match Rank:6
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:AGAYWSAGATKAT-----
---TAGTGATCATCATTA
 C T G A A C T G C G T A A G T C C G T A A T C G C G T A A T C G C G T A A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G A C T G C T A C A T G A G C T C A T G G C T A C G A T G A T C C G T A C A G T G A T C T C G A A G C T A C G T G C T A

GSC2/MA0891.1/Jaspar

Match Rank:7
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:AGAYWSAGATKAT-
----GNGGATTAGN
 C T G A A C T G C G T A A G T C C G T A A T C G C G T A A T C G C G T A A C G T A C G T C G T A A C G T A C G T
A C G T A C G T A C G T A C G T C T A G T A G C T C A G C A T G T G C A C G A T C G A T C G T A C T A G A C T G

Dmbx1/MA0883.1/Jaspar

Match Rank:8
Score:0.55
Offset:0
Orientation:forward strand
Alignment:AGAYWSAGATKAT----
TGAACCGGATTAATGAA
 C T G A A C T G C G T A A G T C C G T A A T C G C G T A A T C G C G T A A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T
G C A T C T A G C T G A C G T A G T A C T G A C T C A G A T C G G T C A A C G T G A C T C G T A C T G A A C G T A T C G G C A T C G T A

PH0025.1_Dmbx1/Jaspar

Match Rank:9
Score:0.55
Offset:0
Orientation:forward strand
Alignment:AGAYWSAGATKAT----
TGAACCGGATTAATGAA
 C T G A A C T G C G T A A G T C C G T A A T C G C G T A A T C G C G T A A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T
G C A T C T A G C T G A C G T A G T A C T G A C T C A G A T C G G T C A A C G T G A C T C G T A C T G A A C G T A T C G G C A T C G T A

GATA(Zf),IR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:10
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-AGAYWSAGATKAT-
NAGATWNBNATCTNN
 A C G T C T G A A C T G C G T A A G T C C G T A A T C G C G T A A T C G C G T A A C G T A C G T C G T A A C G T A C G T
A T G C C G T A A C T G C G T A A C G T G C T A T C G A A G C T C G A T C G T A A C G T A G T C C G A T A C T G G A T C