Information for 23-TTGGCATGTTGCA (Motif 41)

A C G T G A C T C T A G C A T G A T G C G T C A A C G T C A T G A C G T A C G T A C T G A T G C C G T A
Reverse Opposite:
G C A T T A C G T A G C T C G A T C G A G T A C G T C A A C G T T A C G G T A C A G T C C T G A T C G A
p-value:1e-6
log p-value:-1.598e+01
Information Content per bp:1.673
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.06%
Number of Background Sequences with motif36.0
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets45.4 +/- 23.8bp
Average Position of motif in Background45.8 +/- 26.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIA/MA0670.1/Jaspar

Match Rank:1
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--TTGGCATGTTGCA
NNTTGGCANN-----
 A C G T A C G T A C G T G A C T C T A G C A T G A T G C G T C A A C G T C A T G A C G T A C G T A C T G A T G C C G T A
G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C A C G T A C G T A C G T A C G T A C G T

Hic1/MA0739.1/Jaspar

Match Rank:2
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--TTGGCATGTTGCA
GGTTGGCAT------
 A C G T A C G T A C G T G A C T C T A G C A T G A T G C G T C A A C G T C A T G A C G T A C G T A C T G A T G C C G T A
T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:3
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-TTGGCATGTTGCA
NTTGGCANN-----
 A C G T A C G T G A C T C T A G C A T G A T G C G T C A A C G T C A T G A C G T A C G T A C T G A T G C C G T A
A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T A C G T A C G T A C G T A C G T

NFIC::TLX1/MA0119.1/Jaspar

Match Rank:4
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:TTGGCATGTTGCA-
TTGGCATGGTGCCA
 A C G T G A C T C T A G C A T G A T G C G T C A A C G T C A T G A C G T A C G T A C T G A T G C C G T A A C G T
G A C T A C G T A C T G A C T G A G T C C G T A G A C T A T C G A T C G C A G T A C T G A G T C A G T C C G T A

NFIC/MA0161.1/Jaspar

Match Rank:5
Score:0.66
Offset:0
Orientation:forward strand
Alignment:TTGGCATGTTGCA
TTGGCA-------
 A C G T G A C T C T A G C A T G A T G C G T C A A C G T C A T G A C G T A C G T A C T G A T G C C G T A
G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TEAD3/MA0808.1/Jaspar

Match Rank:6
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:TTGGCATGTTGCA
-TGGAATGT----
 A C G T G A C T C T A G C A T G A T G C G T C A A C G T C A T G A C G T A C G T A C T G A T G C C G T A
A C G T G C A T C T A G A C T G G C T A C G T A A C G T A C T G G A C T A C G T A C G T A C G T A C G T

PB0029.1_Hic1_1/Jaspar

Match Rank:7
Score:0.64
Offset:-6
Orientation:reverse strand
Alignment:------TTGGCATGTTGCA
NGTAGGTTGGCATNNN---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C T A G C A T G A T G C G T C A A C G T C A T G A C G T A C G T A C T G A T G C C G T A
C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T A C G T A C G T A C G T

HIC2/MA0738.1/Jaspar

Match Rank:8
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--TTGGCATGTTGCA
NGTGGGCAT------
 A C G T A C G T A C G T G A C T C T A G C A T G A T G C G T C A A C G T C A T G A C G T A C G T A C T G A T G C C G T A
T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T

TEAD1/MA0090.2/Jaspar

Match Rank:9
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TTGGCATGTTGCA
NTGGAATGTG---
 A C G T G A C T C T A G C A T G A T G C G T C A A C G T C A T G A C G T A C G T A C T G A T G C C G T A
C T G A G C A T T C A G C A T G C G T A T C G A C A G T A C T G A G C T C T A G A C G T A C G T A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:10
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TTGGCATGTTGCA
CTTGGCAA------
 A C G T A C G T G A C T C T A G C A T G A T G C G T C A A C G T C A T G A C G T A C G T A C T G A T G C C G T A
A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A A C G T A C G T A C G T A C G T A C G T A C G T