Information for 7-TGTTAAGCTC (Motif 39)

C G A T T C A G A G C T A C G T C G T A C G T A A C T G A G T C A C G T G A T C
Reverse Opposite:
C T A G G T C A A C T G G T A C A C G T C G A T C G T A C T G A A G T C C G T A
p-value:1e-7
log p-value:-1.730e+01
Information Content per bp:1.772
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif2.52%
Number of Background Sequences with motif251.2
Percentage of Background Sequences with motif0.52%
Average Position of motif in Targets61.2 +/- 26.7bp
Average Position of motif in Background49.9 +/- 29.2bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr2e3/MA0164.1/Jaspar

Match Rank:1
Score:0.66
Offset:4
Orientation:reverse strand
Alignment:TGTTAAGCTC-
----AAGCTTG
 C G A T T C A G A G C T A C G T C G T A C G T A A C T G A G T C A C G T G A T C A C G T
A C G T A C G T A C G T A C G T C G T A C G T A A C T G A T G C A C G T A C G T C T A G

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:2
Score:0.64
Offset:1
Orientation:forward strand
Alignment:TGTTAAGCTC
-GCTAATCC-
 C G A T T C A G A G C T A C G T C G T A C G T A A C T G A G T C A C G T G A T C
A C G T A T C G G A T C G C A T C G T A G T C A A C G T A T G C A G T C A C G T

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:3
Score:0.64
Offset:1
Orientation:forward strand
Alignment:TGTTAAGCTC-
-NYTAATCCYB
 C G A T T C A G A G C T A C G T C G T A C G T A A C T G A G T C A C G T G A T C A C G T
A C G T A T C G G A C T C G A T C G T A C G T A C A G T G A T C G A T C G A T C A G C T

Pitx1/MA0682.1/Jaspar

Match Rank:4
Score:0.63
Offset:2
Orientation:forward strand
Alignment:TGTTAAGCTC
--TTAATCCC
 C G A T T C A G A G C T A C G T C G T A C G T A A C T G A G T C A C G T G A T C
A C G T A C G T G A C T G C A T T C G A C G T A C A G T G A T C G A T C G T A C

PITX3/MA0714.1/Jaspar

Match Rank:5
Score:0.63
Offset:1
Orientation:forward strand
Alignment:TGTTAAGCTC
-CTTAATCCC
 C G A T T C A G A G C T A C G T C G T A C G T A A C T G A G T C A C G T G A T C
A C G T T A G C G A C T G C A T C T G A C T G A C A G T G T A C A G T C G A T C

PH0137.1_Pitx1/Jaspar

Match Rank:6
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--TGTTAAGCTC-----
NTTGTTAATCCCTCTNN
 A C G T A C G T C G A T T C A G A G C T A C G T C G T A C G T A A C T G A G T C A C G T G A T C A C G T A C G T A C G T A C G T A C G T
C G T A C A G T G A C T C A T G G A C T C G A T C G T A C G T A A C G T G A T C A G T C A G T C G A C T A G T C A G C T T G C A C T G A

OTX2/MA0712.1/Jaspar

Match Rank:7
Score:0.62
Offset:2
Orientation:forward strand
Alignment:TGTTAAGCTC
--TTAATCCT
 C G A T T C A G A G C T A C G T C G T A C G T A A C T G A G T C A C G T G A T C
A C G T A C G T G A C T G C A T C G T A C G T A C A G T G A T C A G T C A C G T

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:8
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:TGTTAAGCTC
--YTAATCCY
 C G A T T C A G A G C T A C G T C G T A C G T A A C T G A G T C A C G T G A T C
A C G T A C G T G A T C G C A T C G T A C G T A A C G T G A T C G A T C A G T C

PH0123.1_Obox3/Jaspar

Match Rank:9
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--TGTTAAGCTC-----
ATAGTTAATCCCCCNNA
 A C G T A C G T C G A T T C A G A G C T A C G T C G T A C G T A A C T G A G T C A C G T G A T C A C G T A C G T A C G T A C G T A C G T
C T G A C A G T G C T A C A T G G C A T G C A T C G T A G T C A C A G T G T A C G A T C G A T C G A T C A T G C A G C T T A G C C G T A

OTX1/MA0711.1/Jaspar

Match Rank:10
Score:0.61
Offset:2
Orientation:forward strand
Alignment:TGTTAAGCTC
--TTAATCCG
 C G A T T C A G A G C T A C G T C G T A C G T A A C T G A G T C A C G T G A T C
A C G T A C G T G A C T G C A T C G T A C G T A C A G T T A G C A T G C A T C G