Information for 2-GTGTKTKTSAGCK (Motif 2)

A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T A T G C C G T A A C T G A G T C A C G T
Reverse Opposite:
G T C A C T A G A G T C A C G T A T C G C G T A G T C A C G T A G T C A C G T A T A G C C G T A A G T C
p-value:1e-16
log p-value:-3.771e+01
Information Content per bp:1.873
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.93%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets46.7 +/- 21.2bp
Average Position of motif in Background19.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:1
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:GTGTKTKTSAGCK
---TGAGTCAGCA
 A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T A T G C C G T A A C T G A G T C A C G T
A C G T A C G T A C G T G A C T T A C G C G T A T A C G G A C T G T A C G C T A C T A G A G T C C T G A

POL007.1_BREd/Jaspar

Match Rank:2
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GTGTKTKTSAGCK
GTTTGTT------
 A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T A T G C C G T A A C T G A G T C A C G T
C T A G A C G T C A G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:3
Score:0.55
Offset:8
Orientation:forward strand
Alignment:GTGTKTKTSAGCK
--------CAGCC
 A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T A T G C C G T A A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:4
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GTGTKTKTSAGCK
CTGTCTGTCACCT
 A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T A T G C C G T A A C T G A G T C A C G T
T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:GTGTKTKTSAGCK
-TGTCTGDCACCT
 A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T A T G C C G T A A C T G A G T C A C G T
A C G T G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T

NRL/MA0842.1/Jaspar

Match Rank:6
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:GTGTKTKTSAGCK----
------GTCAGCANNTN
 A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T A T G C C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C A G C G A T G T A C C G T A C A T G A G T C C T G A C G T A C G T A G C A T G C A T

Mafb/MA0117.2/Jaspar

Match Rank:7
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:GTGTKTKTSAGCK----
-----NGTCAGCANTTT
 A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T A T G C C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G T C A T A C G A G C T G T A C C T G A C A T G T A G C C T G A G C A T C G A T G C A T G C A T

PB0130.1_Gm397_2/Jaspar

Match Rank:8
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----GTGTKTKTSAGCK
NNGCGTGTGTGCNGCN-
 A C G T A C G T A C G T A C G T A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T A T G C C G T A A C T G A G T C A C G T
C A G T A C G T C T A G T G A C C A T G A C G T T A C G A G C T C A T G A G C T A C T G A G T C A G T C C A T G A G T C G A C T A C G T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:GTGTKTKTSAGCK
NTGATTGACAGN-
 A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T A T G C C G T A A C T G A G T C A C G T
A C G T C G A T A T C G C G T A A C G T C A G T A C T G C T G A A G T C C T G A A T C G A T C G A C G T

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:10
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:GTGTKTKTSAGCK
-TGAGTGACAGSC
 A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T A T G C C G T A A C T G A G T C A C G T
A C G T C G A T A T C G T C G A A C T G C G A T A T C G C T G A A G T C C G T A A T C G T A C G G A T C